BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030699
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47651.1| unknown [Lotus japonicus]                               80   2e-13
ref|YP_007507157.1| NADH dehydrogenase subunit 2 (chloroplast) [...    55   8e-06
gb|AGE93500.1| NADH-plastoquinone oxidoreductase subunit 2 [Xiph...    55   8e-06
gb|AGE93414.1| NADH-plastoquinone oxidoreductase subunit 2 [Alpi...    55   8e-06
gb|AGE93242.1| NADH-plastoquinone oxidoreductase subunit 2 [Cale...    55   8e-06

>gb|AFK47651.1| unknown [Lotus japonicus]
          Length = 48

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = +3

Query: 6   MKRFHKNSRRIENEVFILYMPDHELVTASNLQKSPNCFELSILGMGYL 149
           MK FH+NSRRIE+EVFILYM DHELVTASNLQK+ NCFE S+ G+ YL
Sbjct: 1   MKGFHENSRRIEDEVFILYMSDHELVTASNLQKNSNCFEFSLFGIEYL 48


>ref|YP_007507157.1| NADH dehydrogenase subunit 2 (chloroplast) [Salvia miltiorrhiza]
          gi|459014554|ref|YP_007507172.1| NADH dehydrogenase
          subunit 2 (chloroplast) [Salvia miltiorrhiza]
          gi|401879787|gb|AFQ30974.1| NADH dehydrogenase subunit
          2 (chloroplast) [Salvia miltiorrhiza]
          gi|401879804|gb|AFQ30991.1| NADH dehydrogenase subunit
          2 (chloroplast) [Salvia miltiorrhiza]
          Length = 510

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -2

Query: 74 MIWHVQNENFILDSTRIFMKAFHL 3
          MIWHVQNENFILDSTRIFMKAFHL
Sbjct: 1  MIWHVQNENFILDSTRIFMKAFHL 24


>gb|AGE93500.1| NADH-plastoquinone oxidoreductase subunit 2 [Xiphidium caeruleum]
          gi|449326940|gb|AGE93517.1| NADH-plastoquinone
          oxidoreductase subunit 2 [Xiphidium caeruleum]
          Length = 510

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -2

Query: 74 MIWHVQNENFILDSTRIFMKAFHL 3
          MIWHVQNENFILDSTRIFMKAFHL
Sbjct: 1  MIWHVQNENFILDSTRIFMKAFHL 24


>gb|AGE93414.1| NADH-plastoquinone oxidoreductase subunit 2 [Alpinia zerumbet]
          gi|449326853|gb|AGE93431.1| NADH-plastoquinone
          oxidoreductase subunit 2 [Alpinia zerumbet]
          Length = 510

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -2

Query: 74 MIWHVQNENFILDSTRIFMKAFHL 3
          MIWHVQNENFILDSTRIFMKAFHL
Sbjct: 1  MIWHVQNENFILDSTRIFMKAFHL 24


>gb|AGE93242.1| NADH-plastoquinone oxidoreductase subunit 2 [Calectasia
          narragara] gi|449326679|gb|AGE93259.1|
          NADH-plastoquinone oxidoreductase subunit 2 [Calectasia
          narragara]
          Length = 510

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -2

Query: 74 MIWHVQNENFILDSTRIFMKAFHL 3
          MIWHVQNENFILDSTRIFMKAFHL
Sbjct: 1  MIWHVQNENFILDSTRIFMKAFHL 24