BLASTX nr result
ID: Coptis24_contig00030699
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030699 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK47651.1| unknown [Lotus japonicus] 80 2e-13 ref|YP_007507157.1| NADH dehydrogenase subunit 2 (chloroplast) [... 55 8e-06 gb|AGE93500.1| NADH-plastoquinone oxidoreductase subunit 2 [Xiph... 55 8e-06 gb|AGE93414.1| NADH-plastoquinone oxidoreductase subunit 2 [Alpi... 55 8e-06 gb|AGE93242.1| NADH-plastoquinone oxidoreductase subunit 2 [Cale... 55 8e-06 >gb|AFK47651.1| unknown [Lotus japonicus] Length = 48 Score = 79.7 bits (195), Expect = 2e-13 Identities = 37/48 (77%), Positives = 42/48 (87%) Frame = +3 Query: 6 MKRFHKNSRRIENEVFILYMPDHELVTASNLQKSPNCFELSILGMGYL 149 MK FH+NSRRIE+EVFILYM DHELVTASNLQK+ NCFE S+ G+ YL Sbjct: 1 MKGFHENSRRIEDEVFILYMSDHELVTASNLQKNSNCFEFSLFGIEYL 48 >ref|YP_007507157.1| NADH dehydrogenase subunit 2 (chloroplast) [Salvia miltiorrhiza] gi|459014554|ref|YP_007507172.1| NADH dehydrogenase subunit 2 (chloroplast) [Salvia miltiorrhiza] gi|401879787|gb|AFQ30974.1| NADH dehydrogenase subunit 2 (chloroplast) [Salvia miltiorrhiza] gi|401879804|gb|AFQ30991.1| NADH dehydrogenase subunit 2 (chloroplast) [Salvia miltiorrhiza] Length = 510 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/24 (100%), Positives = 24/24 (100%) Frame = -2 Query: 74 MIWHVQNENFILDSTRIFMKAFHL 3 MIWHVQNENFILDSTRIFMKAFHL Sbjct: 1 MIWHVQNENFILDSTRIFMKAFHL 24 >gb|AGE93500.1| NADH-plastoquinone oxidoreductase subunit 2 [Xiphidium caeruleum] gi|449326940|gb|AGE93517.1| NADH-plastoquinone oxidoreductase subunit 2 [Xiphidium caeruleum] Length = 510 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/24 (100%), Positives = 24/24 (100%) Frame = -2 Query: 74 MIWHVQNENFILDSTRIFMKAFHL 3 MIWHVQNENFILDSTRIFMKAFHL Sbjct: 1 MIWHVQNENFILDSTRIFMKAFHL 24 >gb|AGE93414.1| NADH-plastoquinone oxidoreductase subunit 2 [Alpinia zerumbet] gi|449326853|gb|AGE93431.1| NADH-plastoquinone oxidoreductase subunit 2 [Alpinia zerumbet] Length = 510 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/24 (100%), Positives = 24/24 (100%) Frame = -2 Query: 74 MIWHVQNENFILDSTRIFMKAFHL 3 MIWHVQNENFILDSTRIFMKAFHL Sbjct: 1 MIWHVQNENFILDSTRIFMKAFHL 24 >gb|AGE93242.1| NADH-plastoquinone oxidoreductase subunit 2 [Calectasia narragara] gi|449326679|gb|AGE93259.1| NADH-plastoquinone oxidoreductase subunit 2 [Calectasia narragara] Length = 510 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/24 (100%), Positives = 24/24 (100%) Frame = -2 Query: 74 MIWHVQNENFILDSTRIFMKAFHL 3 MIWHVQNENFILDSTRIFMKAFHL Sbjct: 1 MIWHVQNENFILDSTRIFMKAFHL 24