BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030690
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...    62   3e-09
ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...    61   3e-08
emb|CBI24149.3| unnamed protein product [Vitis vinifera]               61   3e-08
ref|XP_002516422.1| RNA binding protein, putative [Ricinus commu...    55   1e-06

>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 62.4 bits (150), Expect(2) = 3e-09
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -3

Query: 384 YKPVIASCMSRIDGINHVKWRPSIDILKGEGLELSDFDGSHLS 256
           YKP + +C++RIDGINH+ WRPS+DILK EG+++SD    H S
Sbjct: 126 YKPEVEACINRIDGINHINWRPSVDILKEEGMDVSDMKEVHPS 168



 Score = 23.9 bits (50), Expect(2) = 3e-09
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -1

Query: 413 IASSAAWVEN 384
           IASSAAWVEN
Sbjct: 116 IASSAAWVEN 125


>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score = 60.8 bits (146), Expect(2) = 3e-08
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = -3

Query: 387 EYKPVIASCMSRIDGINHVKWRPSIDILKGEGLELSDFDGSHLSPS 250
           +YKP + +C+SRID INH+ WR S+++LK EGL+L+D  G HL  S
Sbjct: 245 KYKPQVEACISRIDEINHINWRQSVEMLKEEGLDLTDLKGIHLPTS 290



 Score = 21.6 bits (44), Expect(2) = 3e-08
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 413 IASSAAWVE 387
           IASSAAWVE
Sbjct: 236 IASSAAWVE 244


>emb|CBI24149.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 60.8 bits (146), Expect(2) = 3e-08
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = -3

Query: 387 EYKPVIASCMSRIDGINHVKWRPSIDILKGEGLELSDFDGSHLSPS 250
           +YKP + +C+SRID INH+ WR S+++LK EGL+L+D  G HL  S
Sbjct: 125 KYKPQVEACISRIDEINHINWRQSVEMLKEEGLDLTDLKGIHLPTS 170



 Score = 21.6 bits (44), Expect(2) = 3e-08
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 413 IASSAAWVE 387
           IASSAAWVE
Sbjct: 116 IASSAAWVE 124


>ref|XP_002516422.1| RNA binding protein, putative [Ricinus communis]
           gi|223544457|gb|EEF45977.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score = 55.5 bits (132), Expect(2) = 1e-06
 Identities = 22/44 (50%), Positives = 33/44 (75%)
 Frame = -3

Query: 387 EYKPVIASCMSRIDGINHVKWRPSIDILKGEGLELSDFDGSHLS 256
           +YKP + +C+SR+D IN++ WRPS++ILK EG+ +SD    H S
Sbjct: 178 KYKPEVEACISRMDEINYISWRPSVEILKEEGINVSDLKEMHPS 221



 Score = 21.6 bits (44), Expect(2) = 1e-06
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 413 IASSAAWVE 387
           IASSAAWVE
Sbjct: 169 IASSAAWVE 177