BLASTX nr result

ID: Coptis24_contig00030677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030677
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608879.1| hypothetical protein MTR_4g103970 [Medicago ...    62   5e-08
ref|XP_003525668.1| PREDICTED: uncharacterized protein LOC100818...    61   8e-08
ref|XP_003549840.1| PREDICTED: uncharacterized protein LOC100812...    58   7e-07
ref|XP_003634185.1| PREDICTED: uncharacterized protein LOC100246...    58   7e-07
ref|XP_002511236.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_003608879.1| hypothetical protein MTR_4g103970 [Medicago truncatula]
           gi|355509934|gb|AES91076.1| hypothetical protein
           MTR_4g103970 [Medicago truncatula]
          Length = 67

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = +3

Query: 183 NHHQQKQIQCNMGSVSKFKKSCFNGKEDGATSAILLLACIAFAPS 317
           N  QQKQIQCN G   KFK+S  N +EDG +SAIL LACIA APS
Sbjct: 21  NQQQQKQIQCNKGKAGKFKRSSSNVEEDGLSSAILFLACIACAPS 65


>ref|XP_003525668.1| PREDICTED: uncharacterized protein LOC100818618 [Glycine max]
          Length = 69

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +3

Query: 195 QKQIQCNMGSVSKFKKSCFNGKEDGATSAILLLACIAFAPS 317
           QKQIQCN G   KFK+S  N +EDGA+SAIL LACIA+APS
Sbjct: 27  QKQIQCNKGKAGKFKRSSSNLEEDGASSAILFLACIAYAPS 67


>ref|XP_003549840.1| PREDICTED: uncharacterized protein LOC100812292 [Glycine max]
          Length = 69

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +3

Query: 195 QKQIQCNMGSVSKFKKSCFNGKEDGATSAILLLACIAFAPS 317
           QKQIQCN G   KFK+S  N +EDGA+SAIL LACIA +PS
Sbjct: 27  QKQIQCNKGKAGKFKRSSSNLEEDGASSAILFLACIACSPS 67


>ref|XP_003634185.1| PREDICTED: uncharacterized protein LOC100246199 [Vitis vinifera]
          Length = 70

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
 Frame = +3

Query: 186 HHQQKQIQ------CNMGSVSKFKKSCFNGKEDGATSAILLLACIAFAPS 317
           H QQ+Q+Q      CN G  SKFK+S  N +EDGA+SAILLLACIA APS
Sbjct: 19  HQQQQQMQKLQIQYCNKGKASKFKRSSSNLEEDGASSAILLLACIACAPS 68


>ref|XP_002511236.1| conserved hypothetical protein [Ricinus communis]
           gi|255540349|ref|XP_002511239.1| conserved hypothetical
           protein [Ricinus communis] gi|223550351|gb|EEF51838.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223550354|gb|EEF51841.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 71

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +3

Query: 186 HHQQKQIQCNMGSVSKFKKSCFNGKEDGATSAILLLACIA 305
           +  QKQIQCN G   KFK+S  N ++DGA+SAILLLACIA
Sbjct: 26  YQMQKQIQCNKGKTCKFKRSSSNLEDDGASSAILLLACIA 65


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