BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030673
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera]    81   8e-14
ref|XP_004146177.1| PREDICTED: rab proteins geranylgeranyltransf...    81   1e-13
ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransf...    81   1e-13
gb|AAG51329.1|AC020580_9 Rab escort protein, putative; 48705-511...    74   1e-11
ref|XP_002884589.1| gdp dissociation inhibitor family protein [A...    74   1e-11

>emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera]
          Length = 812

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 18/92 (19%)
 Frame = +2

Query: 2   SSANGKSVLHLDPNSFYGGHFSSLCLDDFTSFLTSQ------------------RDFISV 127
           +S+ GKSVLHLD NSFYG HFSSL LD+F+SFLTSQ                   +++++
Sbjct: 33  ASSAGKSVLHLDSNSFYGSHFSSLNLDEFSSFLTSQSAVYSSHPNPPSSVTADAAEYVAL 92

Query: 128 DLKHRCLYTDVEISSPGLSEDMGDSRKFNLDL 223
           DLK R +Y+DVEI+S   S+ +  SRKFNLD+
Sbjct: 93  DLKTRPMYSDVEITSHS-SDPLEHSRKFNLDV 123


>ref|XP_004146177.1| PREDICTED: rab proteins geranylgeranyltransferase component A
           1-like [Cucumis sativus]
          Length = 543

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 15/89 (16%)
 Frame = +2

Query: 2   SSANGKSVLHLDPNSFYGGHFSSLCLDDFTSFLTS---------------QRDFISVDLK 136
           +SA+GK+VLHLDPN +YGGHF++L L D TSFL S                +D++SVDL+
Sbjct: 33  ASASGKTVLHLDPNPYYGGHFATLPLHDLTSFLNSASAPLLPSPPLASYDNQDYVSVDLQ 92

Query: 137 HRCLYTDVEISSPGLSEDMGDSRKFNLDL 223
            R LY+DVEISS         +RKFN+DL
Sbjct: 93  TRSLYSDVEISSYAPEVLQEHARKFNIDL 121


>ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransferase component A
           2-like [Vitis vinifera] gi|296088658|emb|CBI37649.3|
           unnamed protein product [Vitis vinifera]
          Length = 556

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 18/92 (19%)
 Frame = +2

Query: 2   SSANGKSVLHLDPNSFYGGHFSSLCLDDFTSFLTSQ------------------RDFISV 127
           +S+ GKSVLHLD NSFYG HFSSL LD+F+SFLTSQ                   +++++
Sbjct: 33  ASSAGKSVLHLDSNSFYGSHFSSLNLDEFSSFLTSQSAVHSSHPNPPSSVAADAAEYVAL 92

Query: 128 DLKHRCLYTDVEISSPGLSEDMGDSRKFNLDL 223
           DLK R +Y+DVEI+S   S+ +  SRKFNLD+
Sbjct: 93  DLKTRPMYSDVEITSHS-SDPVEHSRKFNLDV 123


>gb|AAG51329.1|AC020580_9 Rab escort protein, putative; 48705-51166 [Arabidopsis thaliana]
          Length = 536

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 18/92 (19%)
 Frame = +2

Query: 2   SSANGKSVLHLDPNSFYGGHFSSLCLDDFTSFL------------------TSQRDFISV 127
           +S++G SVLHLDPN FYG HF+SL L D TSFL                  ++  DFISV
Sbjct: 33  ASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLHSNSVSPPPSPSSPPLPPSNNHDFISV 92

Query: 128 DLKHRCLYTDVEISSPGLSEDMGDSRKFNLDL 223
           DL +R LY+ VEISS         SR+FN+DL
Sbjct: 93  DLVNRSLYSSVEISSFESEILEEHSRRFNVDL 124


>ref|XP_002884589.1| gdp dissociation inhibitor family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330429|gb|EFH60848.1| gdp
           dissociation inhibitor family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 561

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 18/92 (19%)
 Frame = +2

Query: 2   SSANGKSVLHLDPNSFYGGHFSSLCLDDFTSFL------------------TSQRDFISV 127
           +S++G SVLHLDPN FYG HF+SL L D TSFL                  ++  DFISV
Sbjct: 33  ASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLHSNSFSSPPPPSSPPLPPSNNHDFISV 92

Query: 128 DLKHRCLYTDVEISSPGLSEDMGDSRKFNLDL 223
           DL +R LY+ VEISS         SR+FN+DL
Sbjct: 93  DLVNRSLYSSVEISSFESEILEEHSRRFNVDL 124