BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030666
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              190   1e-46
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   190   1e-46
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   187   6e-46
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...   186   2e-45
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  190 bits (482), Expect = 1e-46
 Identities = 95/108 (87%), Positives = 100/108 (92%)
 Frame = +3

Query: 24  ESPNIRAINKSVVHRICSGQVILDLSSAVKELVENGLDAGSTSIEISLKEYGEESFKVID 203
           ESP IRAINK  VHRICSGQVILDLSSAVKELVEN LDAG+TSIEI+LKEYG+E F+VID
Sbjct: 8   ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVID 67

Query: 204 NGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALG 347
           NG GISPNNFKVLALKHHTSK+ DFPDLQSL TFGFRGEALSSLCALG
Sbjct: 68  NGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALG 115


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  190 bits (482), Expect = 1e-46
 Identities = 95/108 (87%), Positives = 100/108 (92%)
 Frame = +3

Query: 24  ESPNIRAINKSVVHRICSGQVILDLSSAVKELVENGLDAGSTSIEISLKEYGEESFKVID 203
           ESP IRAINK  VHRICSGQVILDLSSAVKELVEN LDAG+TSIEI+LKEYG+E F+VID
Sbjct: 8   ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVID 67

Query: 204 NGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALG 347
           NG GISPNNFKVLALKHHTSK+ DFPDLQSL TFGFRGEALSSLCALG
Sbjct: 68  NGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALG 115


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/107 (85%), Positives = 101/107 (94%)
 Frame = +3

Query: 27  SPNIRAINKSVVHRICSGQVILDLSSAVKELVENGLDAGSTSIEISLKEYGEESFKVIDN 206
           SP I+ INK VVHRIC+GQVILDLSSAVKELVEN LDAG+TSIEISLK+YGE+SF+VIDN
Sbjct: 6   SPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQVIDN 65

Query: 207 GSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALG 347
           G G+SPNNFKVLALKHHTSK++DFPDLQSL TFGFRGEALSSLCALG
Sbjct: 66  GCGVSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALG 112


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
           gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
           repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/109 (83%), Positives = 102/109 (93%)
 Frame = +3

Query: 21  VESPNIRAINKSVVHRICSGQVILDLSSAVKELVENGLDAGSTSIEISLKEYGEESFKVI 200
           V+SP I+ INK +VHRIC+GQVILDLSSAVKELVEN LDAG+TSIEISLK+YGEE F+VI
Sbjct: 7   VDSPAIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVI 66

Query: 201 DNGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALG 347
           DNGSGISP NF+VLALKHHTSK+SDFPDLQSL T+GFRGEALSSLC+LG
Sbjct: 67  DNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLG 115


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/104 (84%), Positives = 95/104 (91%)
 Frame = +3

Query: 36  IRAINKSVVHRICSGQVILDLSSAVKELVENGLDAGSTSIEISLKEYGEESFKVIDNGSG 215
           IR INK+ VHRIC+GQVILDLSSAVKELVEN LDAG+TSIEISLK+YG ESF+VIDNG G
Sbjct: 8   IRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQVIDNGCG 67

Query: 216 ISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALG 347
           +SPNNFKVLALKHHTSK+ DF DLQSL TFGFRGEALSSLC LG
Sbjct: 68  VSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLG 111