BLASTX nr result

ID: Coptis24_contig00030648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030648
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|2...   145   5e-42
ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinif...   142   1e-41
ref|XP_002518105.1| conserved hypothetical protein [Ricinus comm...   146   5e-41
ref|XP_003594589.1| MidA-like protein [Medicago truncatula] gi|3...   140   9e-41
ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799...   139   2e-40

>ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|222845956|gb|EEE83503.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  145 bits (366), Expect(2) = 5e-42
 Identities = 67/91 (73%), Positives = 75/91 (82%)
 Frame = -3

Query: 330 KSTDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSGSVSQWKDKSSKQGKKRRTIRLGTDQ 151
           +S D  SYLD KGD+DIFFPTDFWLLER+DHYCSG +    D S+KQGKKRRT+ L T  
Sbjct: 334 RSLDYNSYLDTKGDADIFFPTDFWLLERMDHYCSGWMKPHGDNSTKQGKKRRTLVLDTSA 393

Query: 150 FMEEFGLPSKTRTKDGYNPLLDDFTNTKYLM 58
           FMEEFGLPSKTRTKDGYNPLLDDF NTK+ +
Sbjct: 394 FMEEFGLPSKTRTKDGYNPLLDDFKNTKFYL 424



 Score = 50.8 bits (120), Expect(2) = 5e-42
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -2

Query: 409 IASDFNYLPDVRIPGDRAPLVSTKKD 332
           IASDF+YLPDV IPG+RAPLVSTKKD
Sbjct: 307 IASDFSYLPDVSIPGERAPLVSTKKD 332


>ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinifera]
          Length = 450

 Score =  142 bits (357), Expect(2) = 1e-41
 Identities = 66/90 (73%), Positives = 75/90 (83%)
 Frame = -3

Query: 327 STDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSGSVSQWKDKSSKQGKKRRTIRLGTDQF 148
           S+D  SYLD KGD+DIFFPTDFWLLER+DH+CSG +   + KSSKQG+KRR I L T  F
Sbjct: 353 SSDHSSYLDAKGDADIFFPTDFWLLERMDHFCSGWLKACEYKSSKQGRKRRIITLDTSSF 412

Query: 147 MEEFGLPSKTRTKDGYNPLLDDFTNTKYLM 58
           MEEFGLPSKTRTKDGYNPLLDDF NTK+ +
Sbjct: 413 MEEFGLPSKTRTKDGYNPLLDDFKNTKFYL 442



 Score = 53.1 bits (126), Expect(2) = 1e-41
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -2

Query: 409 IASDFNYLPDVRIPGDRAPLVSTKKD 332
           IASDF+YLPDVRIPG+RAPLVSTKKD
Sbjct: 325 IASDFSYLPDVRIPGERAPLVSTKKD 350


>ref|XP_002518105.1| conserved hypothetical protein [Ricinus communis]
           gi|223542701|gb|EEF44238.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 444

 Score =  146 bits (368), Expect(2) = 5e-41
 Identities = 69/92 (75%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
 Frame = -3

Query: 327 STDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSGSVSQWKDKSSKQGKKRRTIRLGTDQF 148
           S+D +SYL+ KGD+DIFFPTDFWLLE++DHYCSG +   +DKSSKQGKKRRT+ L T  F
Sbjct: 347 SSDYKSYLEAKGDADIFFPTDFWLLEQMDHYCSGWLKLHEDKSSKQGKKRRTLVLDTSSF 406

Query: 147 MEEFGLPSKTRTKDGYNPLLDDFTNTK-YLMI 55
           MEEFGLPSKTRTKDGYNPLLDDF NTK YL +
Sbjct: 407 MEEFGLPSKTRTKDGYNPLLDDFKNTKVYLSV 438



 Score = 46.6 bits (109), Expect(2) = 5e-41
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = -2

Query: 409 IASDFNYLPDVRIPGDRAPLVSTKKD 332
           IASDF++LPDV IPG+ APLVSTKKD
Sbjct: 319 IASDFSFLPDVSIPGEGAPLVSTKKD 344


>ref|XP_003594589.1| MidA-like protein [Medicago truncatula] gi|355483637|gb|AES64840.1|
           MidA-like protein [Medicago truncatula]
          Length = 442

 Score =  140 bits (352), Expect(2) = 9e-41
 Identities = 64/91 (70%), Positives = 75/91 (82%)
 Frame = -3

Query: 330 KSTDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSGSVSQWKDKSSKQGKKRRTIRLGTDQ 151
           +STD + Y+  KGD+DIFFPTDFWLLE+IDHYCSG +    D+SSK+GKKRRTI L T  
Sbjct: 344 RSTDYQDYMQAKGDADIFFPTDFWLLEQIDHYCSGWLKLQDDQSSKKGKKRRTITLETSA 403

Query: 150 FMEEFGLPSKTRTKDGYNPLLDDFTNTKYLM 58
           FMEEFGLP+KT TKDGYNPLLDDF NTK+ +
Sbjct: 404 FMEEFGLPTKTITKDGYNPLLDDFKNTKFYL 434



 Score = 52.0 bits (123), Expect(2) = 9e-41
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -2

Query: 409 IASDFNYLPDVRIPGDRAPLVSTKKD 332
           IASDF+YLPDV+IPG+RAPLVSTKKD
Sbjct: 317 IASDFSYLPDVKIPGERAPLVSTKKD 342


>ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799456 [Glycine max]
          Length = 441

 Score =  139 bits (349), Expect(2) = 2e-40
 Identities = 64/90 (71%), Positives = 74/90 (82%)
 Frame = -3

Query: 327 STDLRSYLDVKGDSDIFFPTDFWLLERIDHYCSGSVSQWKDKSSKQGKKRRTIRLGTDQF 148
           S D  SY++ KGD+DIFFPTDFWLLE+IDHYCSG +    D SSK+GKKRRTI L +  F
Sbjct: 344 SLDYDSYMEAKGDADIFFPTDFWLLEQIDHYCSGWLKLHGDHSSKKGKKRRTITLESSSF 403

Query: 147 MEEFGLPSKTRTKDGYNPLLDDFTNTKYLM 58
           MEEFGLP+KTRTKDGYNPLLDDF NTK+ +
Sbjct: 404 MEEFGLPTKTRTKDGYNPLLDDFKNTKFYL 433



 Score = 52.0 bits (123), Expect(2) = 2e-40
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -2

Query: 409 IASDFNYLPDVRIPGDRAPLVSTKKD 332
           IASDF+YLPDV+IPG+RAPLVSTKKD
Sbjct: 316 IASDFSYLPDVKIPGERAPLVSTKKD 341


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