BLASTX nr result

ID: Coptis24_contig00030641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030641
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322631.1| predicted protein [Populus trichocarpa] gi|2...    96   6e-18
ref|XP_002307990.1| predicted protein [Populus trichocarpa] gi|2...    92   9e-17
ref|XP_002322634.1| predicted protein [Populus trichocarpa] gi|2...    82   7e-14
ref|XP_002307991.1| predicted protein [Populus trichocarpa] gi|2...    78   1e-12
ref|XP_002333751.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>ref|XP_002322631.1| predicted protein [Populus trichocarpa] gi|222867261|gb|EEF04392.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
 Frame = +1

Query: 220 ERVSSVIMEEASKHQSQRG-DWLINIMRDGTDEGSSQSHMNPRIQKVAPRLRDVEAYKKC 396
           E +   I +EA+ H S    +WL  I+ +G  +  +     P+I KV   LR +++ +KC
Sbjct: 3   EEIKISIPQEANSHFSGGPHEWLAFIITEGQIKTGNSQMQVPQIPKVPRLLRQIQSNQKC 62

Query: 397 FDPALASIGPYHHGRPEFQLMEKLKTISARQFVSACNVRPEVVYSKVFEAVVQARECYSE 576
           +DP+L SIGPYHHG+PE + MEKLK     +FV    +  E  Y KV E  + AR CY+E
Sbjct: 63  YDPSLVSIGPYHHGKPELRDMEKLKVTFTSKFVDDSGICIEDFYCKVAEVAIDARRCYAE 122

Query: 577 GST 585
            ST
Sbjct: 123 DST 125


>ref|XP_002307990.1| predicted protein [Populus trichocarpa] gi|222853966|gb|EEE91513.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
 Frame = +1

Query: 217 PERVSSVIMEEASKHQSQR--GDWLINIMRDGTDEGSSQSHMNPRIQKVAPRLRDVEAYK 390
           PE++  VI + AS  QS     +WL ++M    ++  +     P I +V P  R +E   
Sbjct: 2   PEKIDIVIADHASLQQSTSRFDEWLKSMMDRKREQTGNYQLGGPIIPRVPPTFRKIENNS 61

Query: 391 KCFDPALASIGPYHHGRPEFQLMEKLKTISARQFVSACNVRPEVVYSKVFEAVVQARECY 570
            C+DP++ SIGPYHHG+PE + ME  K   A QFV    V P+ ++ KV      AR+CY
Sbjct: 62  GCYDPSVVSIGPYHHGKPELKEMEDNKVTFASQFVMESQVAPDTMFCKVEGVASNARKCY 121

Query: 571 SEGST 585
           +E ST
Sbjct: 122 TEDST 126


>ref|XP_002322634.1| predicted protein [Populus trichocarpa] gi|222867264|gb|EEF04395.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
 Frame = +1

Query: 253 SKHQSQRGDWLINIMRDGTDEGSSQSHMN--PRIQKVAPRLRDVEAYKKCFDPALASIGP 426
           ++  S    WLI IM    ++ S   +    P   KV P LRD++    C+DP++ SIGP
Sbjct: 9   ARSASSEPHWLIEIMNAAEEDTSHDDNQRKGPDFPKVPPTLRDIQQNSDCYDPSVVSIGP 68

Query: 427 YHHGRPEFQLMEKLKTISARQFVSACNVRPEVVYSKVFEAVVQARECYSEGST 585
           YHHG+ + + MEKLK   ARQFV   +   E +Y KV   +  AR  Y E  T
Sbjct: 69  YHHGKKKLEEMEKLKETYARQFVKDKDKPNEQIYGKVEAVLSIARNSYPEDVT 121


>ref|XP_002307991.1| predicted protein [Populus trichocarpa] gi|222853967|gb|EEE91514.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/89 (40%), Positives = 54/89 (60%)
 Frame = +1

Query: 310 DEGSSQSHMNPRIQKVAPRLRDVEAYKKCFDPALASIGPYHHGRPEFQLMEKLKTISARQ 489
           + G +      ++ +V    R +E  KKC DP++ S+GPYHHG+ E + ME+LK   ARQ
Sbjct: 8   ETGGNYQQKGLKVPRVPSTFRKIEQNKKCNDPSMVSLGPYHHGKQELKEMEELKFPMARQ 67

Query: 490 FVSACNVRPEVVYSKVFEAVVQARECYSE 576
           FV  C +  E ++SKV E ++ A +CY E
Sbjct: 68  FVKDCEMPFEAMWSKVKELMIGASKCYVE 96


>ref|XP_002333751.1| predicted protein [Populus trichocarpa] gi|222838354|gb|EEE76719.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/90 (43%), Positives = 52/90 (57%)
 Frame = +1

Query: 316 GSSQSHMNPRIQKVAPRLRDVEAYKKCFDPALASIGPYHHGRPEFQLMEKLKTISARQFV 495
           G+S       + +V    R ++    C++P + SIGPYHHG+ E + MEKLK   A QFV
Sbjct: 7   GNSNQVNELEVPRVPSEFRKMKENTDCYEPLVVSIGPYHHGKKELKEMEKLKAEMAGQFV 66

Query: 496 SACNVRPEVVYSKVFEAVVQARECYSEGST 585
               V  E +YSKV E V  AR+CY+E ST
Sbjct: 67  KDSRVTAEEMYSKVKELVTDARKCYAEEST 96


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