BLASTX nr result

ID: Coptis24_contig00030637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030637
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283617.2| PREDICTED: lariat debranching enzyme [Vitis ...   160   1e-37
emb|CBI19325.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_004159246.1| PREDICTED: lariat debranching enzyme-like [C...   153   1e-35
ref|XP_004138690.1| PREDICTED: lariat debranching enzyme-like [C...   153   1e-35
dbj|BAJ98084.1| predicted protein [Hordeum vulgare subsp. vulgare]    149   2e-34

>ref|XP_002283617.2| PREDICTED: lariat debranching enzyme [Vitis vinifera]
          Length = 415

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/88 (82%), Positives = 79/88 (89%)
 Frame = -1

Query: 266 IIIKCIFL*AVRNAGDLESLNVKPKYRSMNSFWKYYSGEEIVPFPTIFIGGNHEASNYLW 87
           ++I C    AVRN  DLESLNV PKYRSMNSFWKYYSG+E+ PFPTIFIGGNHEASNYLW
Sbjct: 33  LLICCGDFQAVRNKKDLESLNVPPKYRSMNSFWKYYSGQEVAPFPTIFIGGNHEASNYLW 92

Query: 86  ELYYGGWAAPNIYFLGFAGVVKFGSVRI 3
           ELYYGGWAAPNIYFLGFAGVVKFG++RI
Sbjct: 93  ELYYGGWAAPNIYFLGFAGVVKFGNIRI 120


>emb|CBI19325.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/88 (82%), Positives = 79/88 (89%)
 Frame = -1

Query: 266 IIIKCIFL*AVRNAGDLESLNVKPKYRSMNSFWKYYSGEEIVPFPTIFIGGNHEASNYLW 87
           ++I C    AVRN  DLESLNV PKYRSMNSFWKYYSG+E+ PFPTIFIGGNHEASNYLW
Sbjct: 33  LLICCGDFQAVRNKKDLESLNVPPKYRSMNSFWKYYSGQEVAPFPTIFIGGNHEASNYLW 92

Query: 86  ELYYGGWAAPNIYFLGFAGVVKFGSVRI 3
           ELYYGGWAAPNIYFLGFAGVVKFG++RI
Sbjct: 93  ELYYGGWAAPNIYFLGFAGVVKFGNIRI 120


>ref|XP_004159246.1| PREDICTED: lariat debranching enzyme-like [Cucumis sativus]
          Length = 413

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/88 (78%), Positives = 77/88 (87%)
 Frame = -1

Query: 266 IIIKCIFL*AVRNAGDLESLNVKPKYRSMNSFWKYYSGEEIVPFPTIFIGGNHEASNYLW 87
           +++ C    AVRN  DL+SLNV PKYRSMNSFWKYYSG E+ P+PTIFIGGNHEASNYLW
Sbjct: 33  LLLCCGDFQAVRNENDLKSLNVPPKYRSMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLW 92

Query: 86  ELYYGGWAAPNIYFLGFAGVVKFGSVRI 3
           ELYYGGWAAPNIYFLG AGVVKFG++RI
Sbjct: 93  ELYYGGWAAPNIYFLGVAGVVKFGNIRI 120


>ref|XP_004138690.1| PREDICTED: lariat debranching enzyme-like [Cucumis sativus]
          Length = 413

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/88 (78%), Positives = 77/88 (87%)
 Frame = -1

Query: 266 IIIKCIFL*AVRNAGDLESLNVKPKYRSMNSFWKYYSGEEIVPFPTIFIGGNHEASNYLW 87
           +++ C    AVRN  DL+SLNV PKYRSMNSFWKYYSG E+ P+PTIFIGGNHEASNYLW
Sbjct: 33  LLLCCGDFQAVRNENDLKSLNVPPKYRSMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLW 92

Query: 86  ELYYGGWAAPNIYFLGFAGVVKFGSVRI 3
           ELYYGGWAAPNIYFLG AGVVKFG++RI
Sbjct: 93  ELYYGGWAAPNIYFLGVAGVVKFGNIRI 120


>dbj|BAJ98084.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 440

 Score =  149 bits (376), Expect = 2e-34
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = -1

Query: 266 IIIKCIFL*AVRNAGDLESLNVKPKYRSMNSFWKYYSGEEIVPFPTIFIGGNHEASNYLW 87
           ++I C    AVRN  DL+ +NV PK+R+MNSFWKYYSG+ + P+PTIFIGGNHEA+NYLW
Sbjct: 66  LLICCGDFQAVRNESDLQCVNVPPKFRTMNSFWKYYSGQAVAPYPTIFIGGNHEAANYLW 125

Query: 86  ELYYGGWAAPNIYFLGFAGVVKFGSVRI 3
           ELYYGGWAAPNIYFLGFAGVVKFG++RI
Sbjct: 126 ELYYGGWAAPNIYFLGFAGVVKFGNIRI 153


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