BLASTX nr result

ID: Coptis24_contig00030630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030630
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]    57   1e-06

>emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]
          Length = 269

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/103 (35%), Positives = 50/103 (48%)
 Frame = -3

Query: 329 CIDEWFFSHSSCPTCRSPIVAPLVSSEISWPLGESVADDSGTSDHDEDVSDSFVRDESGS 150
           CIDEWF  H++CP CRSP+ A L    +S  + E    +  T+      S+      S  
Sbjct: 120 CIDEWFVGHTNCPLCRSPVTAVL---SLSNAIEEGNGFNRPTAQFQHQRSNG-----SDL 171

Query: 149 NRLLRHCASVALPNEVRLTSKEVVLKRSMSFDCSYVSIKIQKD 21
              LRHC S  L  + +       LKRS+S   SYV I IQ++
Sbjct: 172 GLQLRHCESCVLHMDGKPRPVMAGLKRSLSMGQSYVIIDIQRE 214


Top