BLASTX nr result

ID: Coptis24_contig00030621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030621
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    75   6e-12
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    74   1e-11
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo...    72   4e-11
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G...    72   4e-11
emb|CCH50966.1| T4.5 [Malus x robusta]                                 71   8e-11

>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/82 (41%), Positives = 50/82 (60%)
 Frame = +2

Query: 44  LGHPAQPILVFAQTKLSVKRSSQRSSFLPSCQLGKNHRLPFFLSKGRSSSPLQLIHIDPW 223
           LGHPA  IL    T  ++     +++   +CQ  K+H+LPF +S  R+S P  L+H D W
Sbjct: 178 LGHPADNILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVSVSRASHPFALLHADLW 237

Query: 224 GPSPIASCSGSR*YVSLVDDFS 289
           GP+ I S +G+R ++  VDDFS
Sbjct: 238 GPTSIPSTTGARYFILFVDDFS 259


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/82 (41%), Positives = 49/82 (59%)
 Frame = +2

Query: 44  LGHPAQPILVFAQTKLSVKRSSQRSSFLPSCQLGKNHRLPFFLSKGRSSSPLQLIHIDPW 223
           LGHPA  IL    T  ++     +++   +CQ  K+H+LPF +   R+S PL L+H D W
Sbjct: 526 LGHPADNILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVXVSRASHPLALLHADLW 585

Query: 224 GPSPIASCSGSR*YVSLVDDFS 289
           GP  I S +G+R ++  VDDFS
Sbjct: 586 GPXSIPSTTGARYFILFVDDFS 607


>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
          Length = 499

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +2

Query: 44  LGHPAQPIL--VFAQTKLSVKRSSQRSSFLPSCQLGKNHRLPFFLSKGRSSSPLQLIHID 217
           LGHP+  I+  V +   L     S + S   +CQ GK+H+LP+  S  RSS+PL+LIH D
Sbjct: 331 LGHPSSVIVQQVLSHNNLPCVSESNKHSVCDACQKGKSHQLPYSKSLSRSSAPLELIHSD 390

Query: 218 PWGPSPIASCSGSR*YVSLVDDFS 289
            WGP+P  S   +  YVS VDDFS
Sbjct: 391 VWGPAP-TSVGKNNYYVSFVDDFS 413


>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 572

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +2

Query: 44  LGHPAQPIL--VFAQTKLSVKRSSQRSSFLPSCQLGKNHRLPFFLSKGRSSSPLQLIHID 217
           LGHP+  I+  V +   L     S + S   +CQ GK+H+LP+  S  RSS+PL+LIH D
Sbjct: 404 LGHPSSVIVQQVLSHNNLPCVSESNKHSVCDACQKGKSHQLPYSKSLSRSSAPLELIHSD 463

Query: 218 PWGPSPIASCSGSR*YVSLVDDFS 289
            WGP+P  S   +  YVS VDDFS
Sbjct: 464 VWGPAP-TSVGKNNYYVSFVDDFS 486


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
 Frame = +2

Query: 44  LGHPAQPIL--VFAQTKLSVKRSSQRSSFLPSCQLGKNHRLPFFLSKGRSSSPLQLIHID 217
           LGHP+   L  V  +  L V       S   +CQLGK++RL F      SS PLQL+H D
Sbjct: 736 LGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTD 795

Query: 218 PWGPSPIASCSGSR*YVSLVDDFS 289
            WGPSP +SC+G R Y+ +VDDF+
Sbjct: 796 VWGPSPTSSCTGYRFYLIIVDDFT 819


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