BLASTX nr result
ID: Coptis24_contig00030620
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030620 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22... 154 7e-36 ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like,... 153 1e-35 ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like ... 153 1e-35 ref|XP_002308898.1| condensin complex components subunit [Populu... 153 2e-35 ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ... 147 7e-34 >ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1| condensin, putative [Ricinus communis] Length = 1346 Score = 154 bits (389), Expect = 7e-36 Identities = 76/122 (62%), Positives = 92/122 (75%) Frame = +1 Query: 1 RNAFKIYTYFLLTIVVAEESNGQSGNIXXXXXXXXXXXXXSRKKNSMNLWNWELQRGRIV 180 RNAFKIY++FLL IV++EESN +RKK +N WNWE QRGRI+ Sbjct: 134 RNAFKIYSFFLLNIVLSEESNATVNGTNSRVITS------TRKKKPLNSWNWEPQRGRIL 187 Query: 181 NLVANSLDINLSLLFGSSKPDENYMSYISKTAFSMFENPTMLKDSDTKDALSRMIGACAT 360 NL+ANSL++NL+LLFGSS PDENY+S+I+K AFSM ENP +LKDSD KDAL R+IGACAT Sbjct: 188 NLIANSLEVNLALLFGSSNPDENYLSFIAKNAFSMCENPVLLKDSDAKDALCRIIGACAT 247 Query: 361 KY 366 KY Sbjct: 248 KY 249 >ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like, partial [Cucumis sativus] Length = 1133 Score = 153 bits (387), Expect = 1e-35 Identities = 75/122 (61%), Positives = 93/122 (76%) Frame = +1 Query: 1 RNAFKIYTYFLLTIVVAEESNGQSGNIXXXXXXXXXXXXXSRKKNSMNLWNWELQRGRIV 180 RNAFKIYT+FLL IV +EE+NG S N +RKK + W+WE+QRGRI+ Sbjct: 124 RNAFKIYTFFLLNIVNSEEANGSSSN-------NSKVTASTRKKMPKSSWDWEMQRGRIL 176 Query: 181 NLVANSLDINLSLLFGSSKPDENYMSYISKTAFSMFENPTMLKDSDTKDALSRMIGACAT 360 NL+ANSL+IN+SLLFGSS PDENY+S+++K FSMFEN +LKD DTKDAL R+IGAC+T Sbjct: 177 NLIANSLEINISLLFGSSDPDENYLSFVTKNVFSMFENSVLLKDVDTKDALCRIIGACST 236 Query: 361 KY 366 KY Sbjct: 237 KY 238 >ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like [Cucumis sativus] Length = 1321 Score = 153 bits (387), Expect = 1e-35 Identities = 75/122 (61%), Positives = 93/122 (76%) Frame = +1 Query: 1 RNAFKIYTYFLLTIVVAEESNGQSGNIXXXXXXXXXXXXXSRKKNSMNLWNWELQRGRIV 180 RNAFKIYT+FLL IV +EE+NG S N +RKK + W+WE+QRGRI+ Sbjct: 124 RNAFKIYTFFLLNIVNSEEANGSSSN-------NSKVTASTRKKMPKSSWDWEMQRGRIL 176 Query: 181 NLVANSLDINLSLLFGSSKPDENYMSYISKTAFSMFENPTMLKDSDTKDALSRMIGACAT 360 NL+ANSL+IN+SLLFGSS PDENY+S+++K FSMFEN +LKD DTKDAL R+IGAC+T Sbjct: 177 NLIANSLEINISLLFGSSDPDENYLSFVTKNVFSMFENSVLLKDVDTKDALCRIIGACST 236 Query: 361 KY 366 KY Sbjct: 237 KY 238 >ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa] gi|222854874|gb|EEE92421.1| condensin complex components subunit [Populus trichocarpa] Length = 1334 Score = 153 bits (386), Expect = 2e-35 Identities = 74/122 (60%), Positives = 96/122 (78%) Frame = +1 Query: 1 RNAFKIYTYFLLTIVVAEESNGQSGNIXXXXXXXXXXXXXSRKKNSMNLWNWELQRGRIV 180 RNA KIYT+FL++IV++EES+ S N +RKK S++ WNWE QRGRI+ Sbjct: 131 RNALKIYTFFLVSIVLSEESSASSNN-------KTKMTGPNRKKQSVHSWNWEPQRGRIL 183 Query: 181 NLVANSLDINLSLLFGSSKPDENYMSYISKTAFSMFENPTMLKDSDTKDALSRMIGACAT 360 NL+ANSL+INL+LLFGS+ PDENY+S+I+K AF +FEN T++KDS+TKDAL R+IGACAT Sbjct: 184 NLIANSLEINLALLFGSTDPDENYLSFITKNAFGLFENATLIKDSETKDALCRIIGACAT 243 Query: 361 KY 366 KY Sbjct: 244 KY 245 >ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera] Length = 1346 Score = 147 bits (372), Expect = 7e-34 Identities = 75/122 (61%), Positives = 88/122 (72%) Frame = +1 Query: 1 RNAFKIYTYFLLTIVVAEESNGQSGNIXXXXXXXXXXXXXSRKKNSMNLWNWELQRGRIV 180 RNAFKIYT+FLL I++ EESN SRKK ++ WNWE QRGRI+ Sbjct: 124 RNAFKIYTFFLLNIILIEESN--------IGVNKSKATLSSRKKQPIHSWNWEPQRGRIL 175 Query: 181 NLVANSLDINLSLLFGSSKPDENYMSYISKTAFSMFENPTMLKDSDTKDALSRMIGACAT 360 NL+ANSL+INL LLFGSS PDENY+S+I K FSMFEN +LKDS+TKDAL R+IG CAT Sbjct: 176 NLIANSLEINLPLLFGSSDPDENYLSFIVKNVFSMFENAILLKDSETKDALCRIIGTCAT 235 Query: 361 KY 366 KY Sbjct: 236 KY 237