BLASTX nr result

ID: Coptis24_contig00030615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030615
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002307261.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002277466.2| PREDICTED: B3 domain-containing protein Os01...    62   5e-08
emb|CBI21437.3| unnamed protein product [Vitis vinifera]               62   5e-08
emb|CAN61149.1| hypothetical protein VITISV_029172 [Vitis vinifera]    62   5e-08

>ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|222853633|gb|EEE91180.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/46 (65%), Positives = 40/46 (86%)
 Frame = +2

Query: 182 NSVNEIRSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319
           N+V E RSSAL RA+EVQ NL+P FP+FVK+++ SHV+SCFW+G+P
Sbjct: 82  NTVGETRSSALIRAEEVQSNLEPAFPSFVKSLVRSHVASCFWMGLP 127


>ref|XP_002307261.1| predicted protein [Populus trichocarpa] gi|222856710|gb|EEE94257.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/49 (55%), Positives = 40/49 (81%)
 Frame = +2

Query: 173 QPENSVNEIRSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319
           Q   +V + +SSA+ RA+EVQ NL+P FP+FVK+++ SHV+SCFW+G+P
Sbjct: 75  QRSTTVGDGKSSAMIRAEEVQSNLEPAFPSFVKSLVRSHVASCFWMGLP 123


>ref|XP_002277466.2| PREDICTED: B3 domain-containing protein Os01g0234100-like [Vitis
           vinifera]
          Length = 505

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/40 (65%), Positives = 35/40 (87%)
 Frame = +2

Query: 200 RSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319
           ++SAL RA+EVQ NL P+FP+FVK ++ SHVSSCFW+G+P
Sbjct: 119 KTSALIRAEEVQSNLGPEFPSFVKVLVRSHVSSCFWMGLP 158


>emb|CBI21437.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/40 (65%), Positives = 35/40 (87%)
 Frame = +2

Query: 200 RSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319
           ++SAL RA+EVQ NL P+FP+FVK ++ SHVSSCFW+G+P
Sbjct: 119 KTSALIRAEEVQSNLGPEFPSFVKVLVRSHVSSCFWMGLP 158


>emb|CAN61149.1| hypothetical protein VITISV_029172 [Vitis vinifera]
          Length = 554

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/40 (65%), Positives = 35/40 (87%)
 Frame = +2

Query: 200 RSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319
           ++SAL RA+EVQ NL P+FP+FVK ++ SHVSSCFW+G+P
Sbjct: 168 KTSALIRAEEVQSNLGPEFPSFVKVLVRSHVSSCFWMGLP 207


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