BLASTX nr result
ID: Coptis24_contig00030615
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030615 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|2... 70 1e-10 ref|XP_002307261.1| predicted protein [Populus trichocarpa] gi|2... 65 6e-09 ref|XP_002277466.2| PREDICTED: B3 domain-containing protein Os01... 62 5e-08 emb|CBI21437.3| unnamed protein product [Vitis vinifera] 62 5e-08 emb|CAN61149.1| hypothetical protein VITISV_029172 [Vitis vinifera] 62 5e-08 >ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|222853633|gb|EEE91180.1| predicted protein [Populus trichocarpa] Length = 468 Score = 70.5 bits (171), Expect = 1e-10 Identities = 30/46 (65%), Positives = 40/46 (86%) Frame = +2 Query: 182 NSVNEIRSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319 N+V E RSSAL RA+EVQ NL+P FP+FVK+++ SHV+SCFW+G+P Sbjct: 82 NTVGETRSSALIRAEEVQSNLEPAFPSFVKSLVRSHVASCFWMGLP 127 >ref|XP_002307261.1| predicted protein [Populus trichocarpa] gi|222856710|gb|EEE94257.1| predicted protein [Populus trichocarpa] Length = 456 Score = 65.1 bits (157), Expect = 6e-09 Identities = 27/49 (55%), Positives = 40/49 (81%) Frame = +2 Query: 173 QPENSVNEIRSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319 Q +V + +SSA+ RA+EVQ NL+P FP+FVK+++ SHV+SCFW+G+P Sbjct: 75 QRSTTVGDGKSSAMIRAEEVQSNLEPAFPSFVKSLVRSHVASCFWMGLP 123 >ref|XP_002277466.2| PREDICTED: B3 domain-containing protein Os01g0234100-like [Vitis vinifera] Length = 505 Score = 62.0 bits (149), Expect = 5e-08 Identities = 26/40 (65%), Positives = 35/40 (87%) Frame = +2 Query: 200 RSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319 ++SAL RA+EVQ NL P+FP+FVK ++ SHVSSCFW+G+P Sbjct: 119 KTSALIRAEEVQSNLGPEFPSFVKVLVRSHVSSCFWMGLP 158 >emb|CBI21437.3| unnamed protein product [Vitis vinifera] Length = 508 Score = 62.0 bits (149), Expect = 5e-08 Identities = 26/40 (65%), Positives = 35/40 (87%) Frame = +2 Query: 200 RSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319 ++SAL RA+EVQ NL P+FP+FVK ++ SHVSSCFW+G+P Sbjct: 119 KTSALIRAEEVQSNLGPEFPSFVKVLVRSHVSSCFWMGLP 158 >emb|CAN61149.1| hypothetical protein VITISV_029172 [Vitis vinifera] Length = 554 Score = 62.0 bits (149), Expect = 5e-08 Identities = 26/40 (65%), Positives = 35/40 (87%) Frame = +2 Query: 200 RSSALKRAQEVQVNLDPQFPNFVKNMLHSHVSSCFWLGIP 319 ++SAL RA+EVQ NL P+FP+FVK ++ SHVSSCFW+G+P Sbjct: 168 KTSALIRAEEVQSNLGPEFPSFVKVLVRSHVSSCFWMGLP 207