BLASTX nr result

ID: Coptis24_contig00030602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030602
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...    89   4e-16
ref|XP_004160745.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR...    88   6e-16
ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine...    88   6e-16
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...    88   6e-16
ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16

>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/80 (53%), Positives = 57/80 (71%)
 Frame = -2

Query: 240 KRPKGKTPKEQLPGDLRRVSYNDLRKATNGFSSGNLIGVGKYGSVYRGVLQQDEASVAVK 61
           ++ KG+         L +VSY  L +AT+GFSS NLIGVG +GSVY+G+L  D  ++AVK
Sbjct: 608 RKKKGEPASSSSEKSLLKVSYQSLLRATDGFSSSNLIGVGSFGSVYKGILDHDGTAIAVK 667

Query: 60  VLNLVEHRASKTFMAECEAL 1
           VLNL+   ASK+F+AECEAL
Sbjct: 668 VLNLLRKGASKSFIAECEAL 687


>ref|XP_004160745.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At3g47570-like [Cucumis
           sativus]
          Length = 1023

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = -2

Query: 186 VSYNDLRKATNGFSSGNLIGVGKYGSVYRGVLQQDEASVAVKVLNLVEHRASKTFMAECE 7
           VSYNDL KATN FS  NLIGVG YGSVY+G+L QD++ VAVKV NL    ASK+F+AECE
Sbjct: 699 VSYNDLLKATNEFSPDNLIGVGGYGSVYKGILSQDKSVVAVKVFNLQHRGASKSFLAECE 758

Query: 6   AL 1
           AL
Sbjct: 759 AL 760


>ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Cucumis sativus]
          Length = 1023

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = -2

Query: 186 VSYNDLRKATNGFSSGNLIGVGKYGSVYRGVLQQDEASVAVKVLNLVEHRASKTFMAECE 7
           VSYNDL KATN FS  NLIGVG YGSVY+G+L QD++ VAVKV NL    ASK+F+AECE
Sbjct: 699 VSYNDLLKATNEFSPDNLIGVGGYGSVYKGILSQDKSVVAVKVFNLQHRGASKSFLAECE 758

Query: 6   AL 1
           AL
Sbjct: 759 AL 760


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/80 (57%), Positives = 57/80 (71%)
 Frame = -2

Query: 240  KRPKGKTPKEQLPGDLRRVSYNDLRKATNGFSSGNLIGVGKYGSVYRGVLQQDEASVAVK 61
            K+   K+    L     RVSYN+L KAT GF+S NLIG+G +GSVY+GVL Q +  VAVK
Sbjct: 998  KKTTMKSSSTSLGYGYLRVSYNELLKATCGFASSNLIGMGSFGSVYKGVLSQGKRLVAVK 1057

Query: 60   VLNLVEHRASKTFMAECEAL 1
            VLNL +H ASK+FMAEC+ L
Sbjct: 1058 VLNLQQHGASKSFMAECKVL 1077


>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
           predicted protein [Populus trichocarpa]
          Length = 1017

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/80 (57%), Positives = 58/80 (72%)
 Frame = -2

Query: 240 KRPKGKTPKEQLPGDLRRVSYNDLRKATNGFSSGNLIGVGKYGSVYRGVLQQDEASVAVK 61
           ++ K ++ +  L   L +VSY  L KATNGFSS NLIG G +GSVYRG+L QD+  VA+K
Sbjct: 680 RKRKEQSSELSLKEPLPKVSYEMLLKATNGFSSDNLIGEGGFGSVYRGILDQDDTVVAIK 739

Query: 60  VLNLVEHRASKTFMAECEAL 1
           VLNL    ASK+F+AECEAL
Sbjct: 740 VLNLQTRGASKSFVAECEAL 759


Top