BLASTX nr result

ID: Coptis24_contig00030600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030600
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000...   108   1e-21
ref|XP_004137307.1| PREDICTED: uncharacterized protein At3g15000...   108   1e-21
ref|XP_003540481.1| PREDICTED: uncharacterized protein At3g15000...   107   2e-21
ref|XP_003543219.1| PREDICTED: uncharacterized protein At3g15000...   106   3e-21
ref|XP_004143682.1| PREDICTED: uncharacterized protein At3g15000...   105   6e-21

>ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like,
           partial [Cucumis sativus]
          Length = 278

 Score =  108 bits (269), Expect = 1e-21
 Identities = 53/100 (53%), Positives = 74/100 (74%)
 Frame = -3

Query: 640 LEQPEDDLSRDEIIDKYVKTLAIVLGSEEEARKKIYSVSTQFSFFVVCNVPQKIARRFMG 461
           +E+P++ L+RDEIID Y+KTLA+V+GSEEEAR KIYSVST+  F   C V ++++ +   
Sbjct: 108 MEKPDEQLTRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKE 167

Query: 460 MPGVDSVSSVPDEWLKSADFQFTGEPFVNGQAVPYDPKYH 341
           +P V  V  +PD +L   +  + GEPF++GQAVPYDPKYH
Sbjct: 168 LPKVRWV--LPDSYLDVKNKDYGGEPFIDGQAVPYDPKYH 205


>ref|XP_004137307.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Cucumis sativus]
          Length = 410

 Score =  108 bits (269), Expect = 1e-21
 Identities = 53/100 (53%), Positives = 74/100 (74%)
 Frame = -3

Query: 640 LEQPEDDLSRDEIIDKYVKTLAIVLGSEEEARKKIYSVSTQFSFFVVCNVPQKIARRFMG 461
           +E+P++ L+RDEIID Y+KTLA+V+GSEEEAR KIYSVST+  F   C V ++++ +   
Sbjct: 108 MEKPDEQLTRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKE 167

Query: 460 MPGVDSVSSVPDEWLKSADFQFTGEPFVNGQAVPYDPKYH 341
           +P V  V  +PD +L   +  + GEPF++GQAVPYDPKYH
Sbjct: 168 LPKVRWV--LPDSYLDVKNKDYGGEPFIDGQAVPYDPKYH 205


>ref|XP_003540481.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Glycine max]
          Length = 363

 Score =  107 bits (268), Expect = 2e-21
 Identities = 54/100 (54%), Positives = 72/100 (72%)
 Frame = -3

Query: 640 LEQPEDDLSRDEIIDKYVKTLAIVLGSEEEARKKIYSVSTQFSFFVVCNVPQKIARRFMG 461
           +E+PE D +RD+IID Y+KTLA V+GSEEEAR KIYSVST+  F     V ++++ +   
Sbjct: 103 MEKPEGDPTRDDIIDSYIKTLAKVIGSEEEARMKIYSVSTRHYFAFGALVSEELSIKLKE 162

Query: 460 MPGVDSVSSVPDEWLKSADFQFTGEPFVNGQAVPYDPKYH 341
           +PGV  V  +PD +L   +  + GEPF+NGQAVPYDPKYH
Sbjct: 163 LPGVRWV--LPDSYLNVKEKDYGGEPFINGQAVPYDPKYH 200


>ref|XP_003543219.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Glycine max]
          Length = 401

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/100 (53%), Positives = 71/100 (71%)
 Frame = -3

Query: 640 LEQPEDDLSRDEIIDKYVKTLAIVLGSEEEARKKIYSVSTQFSFFVVCNVPQKIARRFMG 461
           +E+PE D +RD+IID Y+KTLA V+GSEEEAR KIYSVST+  F     V ++++ +   
Sbjct: 101 MEKPEGDPTRDDIIDSYIKTLAKVIGSEEEARMKIYSVSTRHYFAFGALVSEELSYKIKE 160

Query: 460 MPGVDSVSSVPDEWLKSADFQFTGEPFVNGQAVPYDPKYH 341
           +PGV  V  +PD +L   +  + GEPF+NGQA PYDPKYH
Sbjct: 161 LPGVRWV--LPDSYLNVKEKDYGGEPFINGQAAPYDPKYH 198


>ref|XP_004143682.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Cucumis sativus] gi|449531840|ref|XP_004172893.1|
           PREDICTED: uncharacterized protein At3g15000,
           mitochondrial-like [Cucumis sativus]
          Length = 350

 Score =  105 bits (263), Expect = 6e-21
 Identities = 52/100 (52%), Positives = 73/100 (73%)
 Frame = -3

Query: 640 LEQPEDDLSRDEIIDKYVKTLAIVLGSEEEARKKIYSVSTQFSFFVVCNVPQKIARRFMG 461
           +E+P++ L+RDEIID Y+KTLA+V+GSEEEAR KIYSVST+  F   C V ++++ +   
Sbjct: 110 MEKPDEQLTRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKE 169

Query: 460 MPGVDSVSSVPDEWLKSADFQFTGEPFVNGQAVPYDPKYH 341
           +P V  V  +PD +L   +  + GEPF++GQAVPYDP YH
Sbjct: 170 LPKVRWV--LPDSYLDVKNKSYGGEPFIHGQAVPYDPMYH 207


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