BLASTX nr result

ID: Coptis24_contig00030595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030595
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    60   2e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +2

Query: 17  FHVASKLLVIRPWKLLIESEVSELKTLPIWVIMKRLPMELWDKEGF-RLLVWVGVPLGCH 193
           F+  SK  +++PW   +  E+ ELK+ PIW+ +  L + LW  E   ++   VG PL   
Sbjct: 99  FYDGSKPFILKPWSRDLSLEIKELKSAPIWIKLPNLRLHLWSPEALGKIASLVGRPLFAD 158

Query: 194 YLQTNLRKMTSYARVCIEVDIDCPYPEGTTVVVDQKKAFDVAFE 325
            + T  R+   +ARVC+EVD D   P+  T+  D+  ++D   E
Sbjct: 159 TV-TASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVE 201


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +2

Query: 17  FHVASKLLVIRPWKLLIESEVSELKTLPIWVIMKRLPMELWDKEGF-RLLVWVGVPLGCH 193
           F+  SK  +++PW   +  E+ ELK+ P+W+ +  L + LW  E   ++   VG PL   
Sbjct: 99  FYDGSKPFILKPWSRDLSLEIKELKSAPVWIKLPNLRLHLWSPEALSKIASLVGRPLFAD 158

Query: 194 YLQTNLRKMTSYARVCIEVDIDCPYPEGTTVVVDQKKAFDVAFE 325
            + T  R+   +ARVC+EVD D   P+  T+  D+  ++D   E
Sbjct: 159 TV-TASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVE 201


>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +2

Query: 17  FHVASKLLVIRPWKLLIESEVSELKTLPIWVIMKRLPMELWDKEGF-RLLVWVGVPLGCH 193
           F+   K  +++PW   +  E+ ELK+ PIW+ +  L + LW  E   +++  VG PL   
Sbjct: 99  FYDGRKPFILKPWSRDMSLEIEELKSAPIWIKLPNLRLHLWSPEALGKIVSLVGRPLFAD 158

Query: 194 YLQTNLRKMTSYARVCIEVDIDCPYPEGTTVVVDQKKAFDVAFE 325
            + T  R+   +ARVC+EVD D   P+  T+  D+  ++D   E
Sbjct: 159 TV-TASRETLCFARVCVEVDFDKMLPDSITIEDDKGYSYDQKVE 201


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2   LDIGSFHVASKLLVIRPWKLLIESEVSELKTLPIWVIMKRLPMELWDKEGFRLLV-WVGV 178
           L  G +H+  K +++R W   I  E     ++P+W+ + R+P+ELW   G  ++   +G 
Sbjct: 20  LSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELWTDAGLVVVASAIGK 79

Query: 179 PLGCHYLQTNLRKMTSYARVCIEVDIDCPYPEGTTV 286
           PL    L T  R   SYAR+C+E+++D   P   TV
Sbjct: 80  PLSVD-LATKERCRLSYARICVELNVDSTMPIEITV 114


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   LDIGSFHVASKLLVIRPWKLLIESEVSELKTLPIWVIMKRLPMELWDKEGFRLLV-WVGV 178
           L+   +H+A++ LV++ W+  ++    +L  +P+WV +  +P+E W  +G   +   VGV
Sbjct: 209 LERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGV 268

Query: 179 PLGCHYLQTNLRKMTSYARVCIEVD 253
           PL   +  T LRK  SYARVC+E+D
Sbjct: 269 PLHADH-TTLLRKRLSYARVCVEID 292


Top