BLASTX nr result
ID: Coptis24_contig00030593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00030593
(347 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510564.1| multidrug resistance protein 1, 2, putative ... 109 2e-22
ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2... 108 4e-22
ref|XP_003544389.1| PREDICTED: ABC transporter B family member 1... 108 5e-22
ref|XP_002301961.1| multidrug/pheromone exporter, MDR family, AB... 107 1e-21
ref|NP_001172394.1| Os01g0534700 [Oryza sativa Japonica Group] g... 106 2e-21
>ref|XP_002510564.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
gi|223551265|gb|EEF52751.1| multidrug resistance protein
1, 2, putative [Ricinus communis]
Length = 1252
Score = 109 bits (273), Expect = 2e-22
Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD+ SE TVQEAL+KLM+GRTTI++ HRLSTIRD D I VLQHGK E GSH
Sbjct: 1168 LDEATSALDTESEKTVQEALNKLMEGRTTILVAHRLSTIRDADSIAVLQHGKVAEIGSHT 1227
Query: 183 ELMSKPGSVYT*LVSL-HDTNRK 248
+L+ KP S+Y LVSL +T+RK
Sbjct: 1228 QLIGKPDSIYKQLVSLQQETSRK 1250
Score = 90.9 bits (224), Expect = 1e-16
Identities = 48/76 (63%), Positives = 59/76 (77%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD+ SE+ VQ+ALDK+M RTTII+ HRLSTIRDVD I VL++G+ E G+H
Sbjct: 534 LDEATSALDAESELIVQQALDKIMSNRTTIIVAHRLSTIRDVDTIIVLKNGQVAESGNHL 593
Query: 183 ELMSKPGSVYT*LVSL 230
+L+SK G Y LV L
Sbjct: 594 DLISK-GGEYASLVGL 608
>ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2 [Vitis vinifera]
gi|297742073|emb|CBI33860.3| unnamed protein product
[Vitis vinifera]
Length = 1243
Score = 108 bits (271), Expect = 4e-22
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD+ SE +VQEALD++M GRTT+++ HRLSTIR+ DMI V+QHGK VE GSHE
Sbjct: 526 LDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADMIAVVQHGKIVETGSHE 585
Query: 183 ELMSKPGSVYT*LVSLHDT 239
EL+S P S Y LV L +T
Sbjct: 586 ELISNPSSAYASLVQLQET 604
Score = 82.8 bits (203), Expect = 3e-14
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD SE VQ+ALD+LM RTT+++ HRLSTI++ D I V+Q GK +E G+H
Sbjct: 1161 LDEATSALDVESERVVQQALDRLMVNRTTVLVAHRLSTIKNADQISVIQDGKIIEQGTHS 1220
Query: 183 ELMSKPGSVYT*LVSLHDTNRK 248
L+ Y L++L ++
Sbjct: 1221 TLVENREGAYFKLINLQQQQQQ 1242
>ref|XP_003544389.1| PREDICTED: ABC transporter B family member 13-like [Glycine max]
Length = 1250
Score = 108 bits (270), Expect = 5e-22
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD+ SE VQEALDKLM+GRTTI++ HRLST+RD D I VLQ+G+ E GSHE
Sbjct: 1165 LDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLSTVRDADSIAVLQNGRVAEMGSHE 1224
Query: 183 ELMSKPGSVYT*LVSL-HDT 239
LM+KP S+Y LVSL H+T
Sbjct: 1225 RLMAKPASIYKQLVSLQHET 1244
Score = 94.4 bits (233), Expect = 9e-18
Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD+ SE+ VQ+AL+K+M RTTI++ HRLSTIRDVD I VL++G+ VE G+H
Sbjct: 531 LDEATSALDAESELIVQQALEKIMSNRTTIVVAHRLSTIRDVDTIVVLKNGQVVESGTHL 590
Query: 183 ELMSKPGSVYT*LVSLHD----TNRKAIS 257
ELMS G Y LVSL TN ++IS
Sbjct: 591 ELMSNNGE-YVNLVSLQASQSLTNSRSIS 618
>ref|XP_002301961.1| multidrug/pheromone exporter, MDR family, ABC transporter family
[Populus trichocarpa] gi|222843687|gb|EEE81234.1|
multidrug/pheromone exporter, MDR family, ABC transporter
family [Populus trichocarpa]
Length = 1219
Score = 107 bits (267), Expect = 1e-21
Identities = 52/76 (68%), Positives = 62/76 (81%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD+ASE VQEALDKLM+GRTT+++ HRLST+RD D I V+QHG+ VE GSH
Sbjct: 1135 LDEATSALDTASEKLVQEALDKLMEGRTTVLVAHRLSTVRDADSIAVIQHGRVVEIGSHN 1194
Query: 183 ELMSKPGSVYT*LVSL 230
+L+ KP VY LVSL
Sbjct: 1195 QLIGKPSGVYKQLVSL 1210
Score = 91.7 bits (226), Expect = 6e-17
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD+ SE+ VQ+AL+K+M RTTI++ HRLSTIRDVD I VL++G VE GSH
Sbjct: 515 LDEATSALDAESELIVQQALEKIMANRTTIVVAHRLSTIRDVDTIIVLKNGLVVESGSHL 574
Query: 183 ELMSKPG---SVYT*LVSLHDTNRKAI 254
EL+SK G S+ + VS H T+ +I
Sbjct: 575 ELISKGGEYASMASLQVSEHVTDASSI 601
>ref|NP_001172394.1| Os01g0534700 [Oryza sativa Japonica Group]
gi|255673322|dbj|BAH91124.1| Os01g0534700 [Oryza sativa
Japonica Group]
Length = 1253
Score = 106 bits (264), Expect = 2e-21
Identities = 53/85 (62%), Positives = 65/85 (76%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALD SE VQEAL+K+M RTTII+ HRLST+++ DMI VLQHGK VE GSHE
Sbjct: 427 LDEATSALDMESERVVQEALNKVMLERTTIIVAHRLSTVKNADMISVLQHGKLVEQGSHE 486
Query: 183 ELMSKPGSVYT*LVSLHDTNRKAIS 257
ELM KP Y L+ L +T ++A++
Sbjct: 487 ELMKKPEGSYCKLIHLQETRQEAVA 511
Score = 91.3 bits (225), Expect = 8e-17
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +3
Query: 3 LDEATSALDSASEMTVQEALDKLMKGRTTIIITHRLSTIRDVDMICVLQHGKAVEHGSHE 182
LDEATSALDS SE VQEALD+ + GRTT+++ HRLSTI+ D+I VL++G VE G HE
Sbjct: 1091 LDEATSALDSESERVVQEALDREVVGRTTVVVAHRLSTIKGADIIGVLENGTIVEKGRHE 1150
Query: 183 ELMSKPGSVYT*LVSLHDTN 242
ELM G +Y+ LV L ++
Sbjct: 1151 ELMQIKGGIYSSLVELSSSS 1170