BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030592
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510695.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
emb|CBI40732.3| unnamed protein product [Vitis vinifera]              127   7e-28
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]   127   7e-28
ref|XP_002865400.1| pentatricopeptide repeat-containing protein ...   122   2e-26

>ref|XP_002510695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551396|gb|EEF52882.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 195

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/97 (61%), Positives = 74/97 (76%)
 Frame = +3

Query: 33  FLKGSESS*CTRXXXXXXRERIVPSTGTVTSFLEPLCRFGPPYAATVIYKKARKVGCELS 212
           F+KG + +             IVP+TG +TSF+EPLC FGPP+AA +IYKKARK GC++S
Sbjct: 19  FIKGRKVADALEMLDEMLGRGIVPTTGDITSFIEPLCSFGPPHAAMMIYKKARKAGCKIS 78

Query: 213 LKAYKLLLMRLSRFGKCGMILTVWDDMQSCGYSSDME 323
           L AYKLLLMRLSRFGKCGM+L +WD+MQ  GY+SDME
Sbjct: 79  LTAYKLLLMRLSRFGKCGMLLNIWDEMQENGYTSDME 115


>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/76 (77%), Positives = 67/76 (88%)
 Frame = +3

Query: 96  IVPSTGTVTSFLEPLCRFGPPYAATVIYKKARKVGCELSLKAYKLLLMRLSRFGKCGMIL 275
           +V  TGTVTSF+EPLC FGPP+AA VIY KARKVGC++SL AYKLLLMRLSRFGKCGM+L
Sbjct: 408 MVTKTGTVTSFIEPLCSFGPPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMML 467

Query: 276 TVWDDMQSCGYSSDME 323
            +WD+MQ  GYSSDME
Sbjct: 468 KIWDEMQESGYSSDME 483


>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/76 (72%), Positives = 68/76 (89%)
 Frame = +3

Query: 96  IVPSTGTVTSFLEPLCRFGPPYAATVIYKKARKVGCELSLKAYKLLLMRLSRFGKCGMIL 275
           ++P+TG +TSF+EPLC++GPP+AA +IYKKARKVGC +SL AYKLLLMRLSRFGKCGM+L
Sbjct: 365 MIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLL 424

Query: 276 TVWDDMQSCGYSSDME 323
            +WD+MQ  GYSSD E
Sbjct: 425 NLWDEMQESGYSSDTE 440


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/76 (72%), Positives = 68/76 (89%)
 Frame = +3

Query: 96  IVPSTGTVTSFLEPLCRFGPPYAATVIYKKARKVGCELSLKAYKLLLMRLSRFGKCGMIL 275
           ++P+TG +TSF+EPLC++GPP+AA +IYKKARKVGC +SL AYKLLLMRLSRFGKCGM+L
Sbjct: 406 MIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLL 465

Query: 276 TVWDDMQSCGYSSDME 323
            +WD+MQ  GYSSD E
Sbjct: 466 NLWDEMQESGYSSDTE 481


>ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311235|gb|EFH41659.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 675

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/96 (59%), Positives = 70/96 (72%)
 Frame = +3

Query: 36  LKGSESS*CTRXXXXXXRERIVPSTGTVTSFLEPLCRFGPPYAATVIYKKARKVGCELSL 215
           +KG + S             I+P+TG VTSFL+PLC +GPP+AA VIY+K+RK GC +S 
Sbjct: 366 IKGRKVSDALEIFEEMLSRGILPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISE 425

Query: 216 KAYKLLLMRLSRFGKCGMILTVWDDMQSCGYSSDME 323
            AYKLLL RLSRFGKCGM+L VWD+MQ CGY SD+E
Sbjct: 426 SAYKLLLKRLSRFGKCGMLLNVWDEMQECGYPSDVE 461