BLASTX nr result

ID: Coptis24_contig00030581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030581
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH59406.1| eukaryotic translation initiation factor 5A-1 [P...    66   3e-09
ref|XP_004146682.1| PREDICTED: eukaryotic translation initiation...    64   1e-08
gb|AFW90607.1| eukaryotic initiation factor 5A3-like protein [So...    64   1e-08
gb|ABC70326.1| eukaryotic translation initiation factor eIF5A [R...    64   1e-08
sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation init...    64   1e-08

>emb|CAH59406.1| eukaryotic translation initiation factor 5A-1 [Plantago major]
          Length = 159

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/51 (68%), Positives = 38/51 (74%)
 Frame = -1

Query: 275 GHAKCHFVAIDIFNGKKLEDIXXXXXXXXXXPHLNGIDSQLIDISEVGFVN 123
           GHAKCHFVAIDIFNGKKLEDI          PH+N +D QLIDISE GFV+
Sbjct: 54  GHAKCHFVAIDIFNGKKLEDI-VPSSHNCDVPHVNRVDYQLIDISEDGFVS 103


>ref|XP_004146682.1| PREDICTED: eukaryotic translation initiation factor 5A-like
           [Cucumis sativus] gi|449519836|ref|XP_004166940.1|
           PREDICTED: eukaryotic translation initiation factor
           5A-like [Cucumis sativus]
          Length = 160

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/51 (68%), Positives = 37/51 (72%)
 Frame = -1

Query: 275 GHAKCHFVAIDIFNGKKLEDIXXXXXXXXXXPHLNGIDSQLIDISEVGFVN 123
           GHAKCHFVAIDIFNGKKLEDI          PH+N  D QLIDISE GFV+
Sbjct: 54  GHAKCHFVAIDIFNGKKLEDI-VPSSHNCDVPHVNRTDYQLIDISEDGFVS 103


>gb|AFW90607.1| eukaryotic initiation factor 5A3-like protein [Solanum tuberosum]
          Length = 160

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/51 (68%), Positives = 37/51 (72%)
 Frame = -1

Query: 275 GHAKCHFVAIDIFNGKKLEDIXXXXXXXXXXPHLNGIDSQLIDISEVGFVN 123
           GHAKCHFVAIDIFNGKKLEDI          PH+N  D QLIDISE GFV+
Sbjct: 54  GHAKCHFVAIDIFNGKKLEDI-VPSSHNCDVPHVNRTDYQLIDISEDGFVS 103


>gb|ABC70326.1| eukaryotic translation initiation factor eIF5A [Rosa chinensis]
          Length = 157

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/51 (68%), Positives = 37/51 (72%)
 Frame = -1

Query: 275 GHAKCHFVAIDIFNGKKLEDIXXXXXXXXXXPHLNGIDSQLIDISEVGFVN 123
           GHAKCHFVAIDIFNGKKLEDI          PH+N  D QLIDISE GFV+
Sbjct: 54  GHAKCHFVAIDIFNGKKLEDI-VPSSHNCDVPHVNRTDYQLIDISEDGFVS 103


>sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation initiation factor 5A;
           Short=eIF-5A gi|6689385|emb|CAB65463.1| translation
           initiation factor 5A precursor protein (eIF-5A) [Senecio
           vernalis]
          Length = 159

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/51 (68%), Positives = 37/51 (72%)
 Frame = -1

Query: 275 GHAKCHFVAIDIFNGKKLEDIXXXXXXXXXXPHLNGIDSQLIDISEVGFVN 123
           GHAKCHFVAIDIFNGKKLEDI          PH+N  D QLIDISE GFV+
Sbjct: 54  GHAKCHFVAIDIFNGKKLEDI-VPSSHNCDVPHVNRTDYQLIDISEDGFVS 103


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