BLASTX nr result

ID: Coptis24_contig00030576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030576
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331547.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_002331548.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-37
ref|XP_002518440.1| conserved hypothetical protein [Ricinus comm...   157   1e-36
ref|XP_002331546.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_002332482.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35

>ref|XP_002331547.1| predicted protein [Populus trichocarpa] gi|222873771|gb|EEF10902.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  159 bits (401), Expect = 3e-37
 Identities = 64/95 (67%), Positives = 79/95 (83%)
 Frame = -1

Query: 286 GVSRFLAQKKPKGKLTCNKYPKICRAKGSPGRSCCKKKCVNVMTDQQNCGMCGNRCRYPQ 107
           G +RFLAQK  +  +TC+KYP+ CRAKGSPG  CCKKKCVNVMTD+ NCGMCG +C+YP+
Sbjct: 59  GANRFLAQKI-RAVMTCDKYPRACRAKGSPGPDCCKKKCVNVMTDRLNCGMCGKKCKYPE 117

Query: 106 ICCRGNCVNPRNDRKNCGGCSIRCKRGDFCSYGMC 2
           ICC+G CVNP +++KNCGGCS +CK+G  C YGMC
Sbjct: 118 ICCKGQCVNPMSNKKNCGGCSNKCKKGSKCQYGMC 152


>ref|XP_002331548.1| predicted protein [Populus trichocarpa] gi|222873772|gb|EEF10903.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  157 bits (398), Expect = 6e-37
 Identities = 63/95 (66%), Positives = 78/95 (82%)
 Frame = -1

Query: 286 GVSRFLAQKKPKGKLTCNKYPKICRAKGSPGRSCCKKKCVNVMTDQQNCGMCGNRCRYPQ 107
           G +RFLAQ +    +TC+KYP+ CRAKGSPG  CCKKKCVNVMTD+ NCGMCG +C+YP+
Sbjct: 57  GANRFLAQTR--AVMTCDKYPRACRAKGSPGPDCCKKKCVNVMTDKLNCGMCGKKCKYPE 114

Query: 106 ICCRGNCVNPRNDRKNCGGCSIRCKRGDFCSYGMC 2
           ICC+G CVNP +++KNCGGCS +CK+G  C YGMC
Sbjct: 115 ICCKGQCVNPMSNKKNCGGCSNKCKKGSTCQYGMC 149


>ref|XP_002518440.1| conserved hypothetical protein [Ricinus communis]
           gi|223542285|gb|EEF43827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score =  157 bits (396), Expect = 1e-36
 Identities = 61/95 (64%), Positives = 78/95 (82%)
 Frame = -1

Query: 286 GVSRFLAQKKPKGKLTCNKYPKICRAKGSPGRSCCKKKCVNVMTDQQNCGMCGNRCRYPQ 107
           G +RFLAQK  +  +TC+KYP++CRAKGSPG  CCKKKCVNVMTD  NCG CG +C+YP+
Sbjct: 62  GANRFLAQKTSQAVMTCDKYPRVCRAKGSPGPDCCKKKCVNVMTDGLNCGNCGKKCKYPE 121

Query: 106 ICCRGNCVNPRNDRKNCGGCSIRCKRGDFCSYGMC 2
           ICC+G CVNP ++ K+CGGC+ +CK+G+ C YGMC
Sbjct: 122 ICCKGGCVNPMSNNKHCGGCNNKCKKGNKCVYGMC 156


>ref|XP_002331546.1| predicted protein [Populus trichocarpa] gi|222873770|gb|EEF10901.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  155 bits (392), Expect = 3e-36
 Identities = 61/95 (64%), Positives = 78/95 (82%)
 Frame = -1

Query: 286 GVSRFLAQKKPKGKLTCNKYPKICRAKGSPGRSCCKKKCVNVMTDQQNCGMCGNRCRYPQ 107
           G +RFLAQ +    +TC+KYP++CR  GSPG  CCKKKCVNV+TD+ NCGMCGN+C+YP+
Sbjct: 49  GANRFLAQTR--AVMTCDKYPRVCRVIGSPGPDCCKKKCVNVITDRLNCGMCGNKCKYPE 106

Query: 106 ICCRGNCVNPRNDRKNCGGCSIRCKRGDFCSYGMC 2
           ICC+G CVNP +++KNCGGCS +CK+G  C YGMC
Sbjct: 107 ICCKGQCVNPMSNKKNCGGCSNKCKKGSTCQYGMC 141


>ref|XP_002332482.1| predicted protein [Populus trichocarpa] gi|222832733|gb|EEE71210.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score =  152 bits (383), Expect = 4e-35
 Identities = 59/93 (63%), Positives = 79/93 (84%)
 Frame = -1

Query: 280 SRFLAQKKPKGKLTCNKYPKICRAKGSPGRSCCKKKCVNVMTDQQNCGMCGNRCRYPQIC 101
           +RFLAQK  +  +TCNKYP++CRAKGSPG  CCKKKCVNV+TD+ NCGMCG +C+Y +IC
Sbjct: 1   NRFLAQKT-RAAMTCNKYPRVCRAKGSPGPDCCKKKCVNVLTDRLNCGMCGKKCKYAEIC 59

Query: 100 CRGNCVNPRNDRKNCGGCSIRCKRGDFCSYGMC 2
           C+G+CV P +++K+CGGC+ +CK+G+ C YGMC
Sbjct: 60  CKGDCVKPMSNKKHCGGCNNKCKKGNACVYGMC 92


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