BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030574
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subun...   419   e-115
ref|XP_002517246.1| chromatin assembly factor I P60 subunit, put...   416   e-114
ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab...   402   e-110
ref|NP_974992.1| transducin/WD40 domain-containing protein [Arab...   400   e-109
ref|NP_974991.1| transducin/WD40 domain-containing protein [Arab...   400   e-109

>ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera]
            gi|296088566|emb|CBI37557.3| unnamed protein product
            [Vitis vinifera]
          Length = 456

 Score =  419 bits (1078), Expect = e-115
 Identities = 220/340 (64%), Positives = 264/340 (77%), Gaps = 4/340 (1%)
 Frame = +2

Query: 2    YLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDQYVASLSSDRSCRIYMNKP 181
            +L+SGSVDNSCIIWD  KGSVHQILD HLHYVQGVAWDP  +YVASLSSDRSCRIY+NKP
Sbjct: 126  FLISGSVDNSCIIWDVNKGSVHQILDAHLHYVQGVAWDPQSKYVASLSSDRSCRIYVNKP 185

Query: 182  QKTKSKGPKVMNYVPTNVITKAEQKQSDDSKVLPSKIHLFHDETLPSFFRRLAWSPDGSF 361
            Q  K+KG + MNYV  +VITK+EQ+ +DDSK + S  HLFHDETLPSFFRRL WSPDGSF
Sbjct: 186  QN-KTKGIEKMNYVCQHVITKSEQQMTDDSKSVKS--HLFHDETLPSFFRRLKWSPDGSF 242

Query: 362  LVAPAGSYKLS-ASDSLNTAYIFLRKDLSRPALQLPTANKPIVAVRFCPVVFNLRGSNSG 538
            L+ PAGSYK S AS  +NTAY+F RKDLSRPALQLP ++KP++AVRFCP+ F+L+GSNS 
Sbjct: 243  LLVPAGSYKFSPASGPVNTAYVFSRKDLSRPALQLPGSSKPVIAVRFCPMAFHLQGSNSA 302

Query: 539  KFFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAITDIAWSSNAKYVALSSQDG 718
             FF LP+R IFAVA+LNSLYIYDTES+PPIAI AGLHYAAITDIAWS + KY+A+SSQDG
Sbjct: 303  GFFKLPYRLIFAVASLNSLYIYDTESIPPIAILAGLHYAAITDIAWSHDGKYLAISSQDG 362

Query: 719  YCTLVEFESGEFGSPISKPENKECQEDEDKNVISQ--ELEDMEITPEVGNAVETKPSE-G 889
            Y TLVEFE+GE GSP    E +    DE K+ + Q   +E  E T  V  +V+++  E G
Sbjct: 363  YSTLVEFENGELGSPFLLSEVESVSGDEKKSPVQQPKAMEVEETTQVVTVSVDSRKREVG 422

Query: 890  NDEIQTSPPNTIPTSDANEPTVTPISNKPVKRRITPMVID 1009
             ++++ + PN   +S     T TP   KP KRRITP+ I+
Sbjct: 423  RNDLKEASPNATSSS-----TSTP---KPAKRRITPVSIE 454


>ref|XP_002517246.1| chromatin assembly factor I P60 subunit, putative [Ricinus communis]
            gi|223543617|gb|EEF45146.1| chromatin assembly factor I
            P60 subunit, putative [Ricinus communis]
          Length = 455

 Score =  416 bits (1069), Expect = e-114
 Identities = 218/337 (64%), Positives = 255/337 (75%), Gaps = 1/337 (0%)
 Frame = +2

Query: 2    YLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDQYVASLSSDRSCRIYMNKP 181
            +L+SGSVDNSCIIWD  KGSVHQILDGH HYVQGVAWDPL +Y ASLSSDR+CR+Y++K 
Sbjct: 126  FLISGSVDNSCIIWDVNKGSVHQILDGHFHYVQGVAWDPLAKYAASLSSDRTCRVYVHKS 185

Query: 182  QKTKSKGPKVMNYVPTNVITKAEQKQSDDSKVLPSKIHLFHDETLPSFFRRLAWSPDGSF 361
            Q  K K  + MNYV  +VI+KAEQ  SD      SK HLFHDETLPSFFRRLAWSPDGSF
Sbjct: 186  QP-KGKVVEKMNYVCQHVISKAEQPLSDAKS---SKNHLFHDETLPSFFRRLAWSPDGSF 241

Query: 362  LVAPAGSYKLS-ASDSLNTAYIFLRKDLSRPALQLPTANKPIVAVRFCPVVFNLRGSNSG 538
            LV PAGSYK S ASD++NT Y+F RKD SRPAL LP A+KP+VAVRFCP+ F+LR S+S 
Sbjct: 242  LVVPAGSYKTSPASDTVNTTYVFSRKDFSRPALLLPGASKPVVAVRFCPMAFSLRESHSA 301

Query: 539  KFFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAITDIAWSSNAKYVALSSQDG 718
             FF LP+R IFAVATLNSLYIYDTES PPIAI AGLHYAAITDIAWSSNA+Y+A+SSQDG
Sbjct: 302  GFFKLPYRLIFAVATLNSLYIYDTESAPPIAILAGLHYAAITDIAWSSNAQYLAVSSQDG 361

Query: 719  YCTLVEFESGEFGSPISKPENKECQEDEDKNVISQELEDMEITPEVGNAVETKPSEGNDE 898
            YCTLVEFE  E G PI+  E+K    +E+K++I ++ +D+ I     ++  T P     E
Sbjct: 362  YCTLVEFEINELGLPITLGEHKNDIVEENKSLIVEKPDDIIIETHTDDS-STAPESRETE 420

Query: 899  IQTSPPNTIPTSDANEPTVTPISNKPVKRRITPMVID 1009
            ++      +  S  N    TPIS KP KRRITPM ID
Sbjct: 421  VEKHEKKQVLPSPVN----TPISTKPAKRRITPMAID 453


>ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp.
            lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein
            ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  402 bits (1033), Expect = e-110
 Identities = 211/366 (57%), Positives = 260/366 (71%), Gaps = 30/366 (8%)
 Frame = +2

Query: 2    YLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDQYVASLSSDRSCRIYMNKP 181
            YL+SGSVDNSCIIWD  KG+VHQILD H HYVQGVAWDPL +YVASLSSDR+CRIY+NKP
Sbjct: 126  YLISGSVDNSCIIWDVSKGTVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYVNKP 185

Query: 182  QKTKSKGPKVMNYVPTNVITKAEQKQSDDSKVLPSKIHLFHDETLPSFFRRLAWSPDGSF 361
            Q TKSKG + +NYV  +VITKA+Q++ D++K +  K HLFHDETLPSFFRRL+WSPDGSF
Sbjct: 186  Q-TKSKGVEKLNYVCQHVITKADQQRGDETKTI--KTHLFHDETLPSFFRRLSWSPDGSF 242

Query: 362  LVAPAGSYKLS-ASDSLNTAYIFLRKDLSRPALQLPTANKPIVAVRFCPVVFNLRGSNSG 538
            L+ PAGS+K+S  S+++N  Y+F RKDLSRPALQLP A+KP+V VRFCPV F LRGS+S 
Sbjct: 243  LLIPAGSFKVSPTSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSHSE 302

Query: 539  K-FFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAITDIAWSSNAKYVALSSQD 715
            + FF LP+R +FA+ATLNS+YIYDTE V PIA+ AGLHYAAITDI WS NA Y+ALSSQD
Sbjct: 303  EGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQD 362

Query: 716  GYCTLVEFESGEFGS--PISKPENKECQEDEDKNVISQELEDM--EITPEV--------- 856
            GYCTLVEFE  E G   PIS    ++  + E+K    ++ +++  E TP+V         
Sbjct: 363  GYCTLVEFEDNELGESIPISITVGRKPVDAEEKKHDLEKADELMTETTPDVSKKQAELQQ 422

Query: 857  ---------------GNAVETKPSEGNDEIQTSPPNTIPTSDANEPTVTPISNKPVKRRI 991
                           G   E    + +DE+ T   +            TP+SNKP ++RI
Sbjct: 423  NEENKQPLPSKITTDGEEKEHVMQKTDDEVMTETRHEEENQPLQSKVNTPVSNKPARKRI 482

Query: 992  TPMVID 1009
            TPM ID
Sbjct: 483  TPMAID 488


>ref|NP_974992.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|332010545|gb|AED97928.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 428

 Score =  400 bits (1028), Expect = e-109
 Identities = 213/366 (58%), Positives = 262/366 (71%), Gaps = 30/366 (8%)
 Frame = +2

Query: 2    YLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDQYVASLSSDRSCRIYMNKP 181
            YL+SGSVDNSCIIWD  KGSVHQILD H HYVQGVAWDPL +YVASLSSDR+CRIY NKP
Sbjct: 67   YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKP 126

Query: 182  QKTKSKGPKVMNYVPTNVITKAEQKQSDDSKVLPSKIHLFHDETLPSFFRRLAWSPDGSF 361
            Q TKSKG + MNYV  +VI KA+Q++ D++K +  K HLFHDETLPSFFRRL+WSPDGSF
Sbjct: 127  Q-TKSKGVEKMNYVCQHVIMKADQQRGDETKTI--KTHLFHDETLPSFFRRLSWSPDGSF 183

Query: 362  LVAPAGSYKLS-ASDSLNTAYIFLRKDLSRPALQLPTANKPIVAVRFCPVVFNLRGSNSG 538
            L+ PAGS+K+S  S+++N  Y+F RKDLSRPALQLP A+KP+V VRFCPV F LRGS+S 
Sbjct: 184  LLIPAGSFKVSPTSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSSSE 243

Query: 539  K-FFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAITDIAWSSNAKYVALSSQD 715
            + FF LP+R +FA+ATLNS+YIYDTE V PIA+ AGLHYAAITDI WS NA Y+ALSSQD
Sbjct: 244  EGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQD 303

Query: 716  GYCTLVEFESGEFGSPISKPENKECQEDEDKNVISQELEDM--EITPEVGNAVETKPSEG 889
            GYCTLVEFE  E G  +S    K+  + E+K    ++ +++  E TP+   + +    E 
Sbjct: 304  GYCTLVEFEDKELGEAVSISVGKKPVDGEEKKHDLEKGDELMTETTPD--ESKKQAELEQ 361

Query: 890  NDEIQTSPPNTIPT----------------------SDANEP----TVTPISNKPVKRRI 991
            N+E +   P+ I T                       + N+P      TP+SNKP ++RI
Sbjct: 362  NEESKQPLPSKITTDGKEKEHIMQKTDDEVMTETRHEEENQPLQSKVNTPVSNKPARKRI 421

Query: 992  TPMVID 1009
            TPM ID
Sbjct: 422  TPMAID 427


>ref|NP_974991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|75337830|sp|Q9SXY1.1|FAS2_ARATH RecName:
            Full=Chromatin assembly factor 1 subunit FAS2;
            Short=CAF-1 subunit FAS2; AltName: Full=CAF-1 p60
            homolog; AltName: Full=Protein FASCIATA 2
            gi|4884488|dbj|BAA77766.1| FAS2 [Arabidopsis thaliana]
            gi|10178066|dbj|BAB11430.1| FAS2 [Arabidopsis thaliana]
            gi|332010547|gb|AED97930.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  400 bits (1028), Expect = e-109
 Identities = 213/366 (58%), Positives = 262/366 (71%), Gaps = 30/366 (8%)
 Frame = +2

Query: 2    YLVSGSVDNSCIIWDAIKGSVHQILDGHLHYVQGVAWDPLDQYVASLSSDRSCRIYMNKP 181
            YL+SGSVDNSCIIWD  KGSVHQILD H HYVQGVAWDPL +YVASLSSDR+CRIY NKP
Sbjct: 126  YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKP 185

Query: 182  QKTKSKGPKVMNYVPTNVITKAEQKQSDDSKVLPSKIHLFHDETLPSFFRRLAWSPDGSF 361
            Q TKSKG + MNYV  +VI KA+Q++ D++K +  K HLFHDETLPSFFRRL+WSPDGSF
Sbjct: 186  Q-TKSKGVEKMNYVCQHVIMKADQQRGDETKTI--KTHLFHDETLPSFFRRLSWSPDGSF 242

Query: 362  LVAPAGSYKLS-ASDSLNTAYIFLRKDLSRPALQLPTANKPIVAVRFCPVVFNLRGSNSG 538
            L+ PAGS+K+S  S+++N  Y+F RKDLSRPALQLP A+KP+V VRFCPV F LRGS+S 
Sbjct: 243  LLIPAGSFKVSPTSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSSSE 302

Query: 539  K-FFNLPHRFIFAVATLNSLYIYDTESVPPIAIFAGLHYAAITDIAWSSNAKYVALSSQD 715
            + FF LP+R +FA+ATLNS+YIYDTE V PIA+ AGLHYAAITDI WS NA Y+ALSSQD
Sbjct: 303  EGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQD 362

Query: 716  GYCTLVEFESGEFGSPISKPENKECQEDEDKNVISQELEDM--EITPEVGNAVETKPSEG 889
            GYCTLVEFE  E G  +S    K+  + E+K    ++ +++  E TP+   + +    E 
Sbjct: 363  GYCTLVEFEDKELGEAVSISVGKKPVDGEEKKHDLEKGDELMTETTPD--ESKKQAELEQ 420

Query: 890  NDEIQTSPPNTIPT----------------------SDANEP----TVTPISNKPVKRRI 991
            N+E +   P+ I T                       + N+P      TP+SNKP ++RI
Sbjct: 421  NEESKQPLPSKITTDGKEKEHIMQKTDDEVMTETRHEEENQPLQSKVNTPVSNKPARKRI 480

Query: 992  TPMVID 1009
            TPM ID
Sbjct: 481  TPMAID 486