BLASTX nr result

ID: Coptis24_contig00030567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030567
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264188.2| PREDICTED: putative cyclin-B3-1-like [Vitis ...   354   2e-95
emb|CBI24160.3| unnamed protein product [Vitis vinifera]              354   2e-95
ref|XP_003530394.1| PREDICTED: putative cyclin-B3-1-like [Glycin...   337   2e-90
ref|XP_002311288.1| predicted protein [Populus trichocarpa] gi|2...   335   9e-90
ref|XP_002316151.1| predicted protein [Populus trichocarpa] gi|2...   330   2e-88

>ref|XP_002264188.2| PREDICTED: putative cyclin-B3-1-like [Vitis vinifera]
          Length = 673

 Score =  354 bits (908), Expect = 2e-95
 Identities = 173/242 (71%), Positives = 207/242 (85%)
 Frame = +1

Query: 7    EAQYPSLSNYMNSQTNLTPKMRGILINWLIEVHSKFGLMQETLFLMVAVFDRFVSVVTIQ 186
            EAQ PS+ NYM+ Q+++TP+MRGILINWLIEVH KF LMQETL+LMV +FDR++S+V I+
Sbjct: 432  EAQNPSMQNYMSIQSDITPQMRGILINWLIEVHYKFELMQETLYLMVTLFDRYLSLVPIK 491

Query: 187  TNEIQLVGLTALLLASKYEDFWHPKVNELIAITDDSYTRLQMLSMEKLILKKLMFRLNTP 366
             N++QLVGLTALLLASKYEDFWHP+V +LI+I+ +SYTR QML MEK++L KL FRLN P
Sbjct: 492  KNDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKVVLNKLKFRLNVP 551

Query: 367  TPYVFMLRFLKAAQSDKKLEHLAFYLIELCLTEYEALKFRSSLLCPSAIYVARCTLQMSP 546
            TPYVFM+RFLKAAQSDK+LEHLAFYLIELCL EYEALK++ SLLC SAIY+ARCTLQ +P
Sbjct: 552  TPYVFMMRFLKAAQSDKRLEHLAFYLIELCLVEYEALKYKPSLLCASAIYLARCTLQRAP 611

Query: 547  AWTPLLCKHAHYEESELRDCAEMILRFHKASSKGPLKVTYGKYICESYLCVAKIKALDRL 726
            AWTPLL KHA YEES++RDCAEMIL+F KA+  G LKVTY KY+      VA I  L+RL
Sbjct: 612  AWTPLLHKHARYEESQIRDCAEMILKFQKAARTGQLKVTYEKYMRPDQSGVAAITPLNRL 671

Query: 727  PQ 732
            P+
Sbjct: 672  PR 673


>emb|CBI24160.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  354 bits (908), Expect = 2e-95
 Identities = 173/242 (71%), Positives = 207/242 (85%)
 Frame = +1

Query: 7    EAQYPSLSNYMNSQTNLTPKMRGILINWLIEVHSKFGLMQETLFLMVAVFDRFVSVVTIQ 186
            EAQ PS+ NYM+ Q+++TP+MRGILINWLIEVH KF LMQETL+LMV +FDR++S+V I+
Sbjct: 363  EAQNPSMQNYMSIQSDITPQMRGILINWLIEVHYKFELMQETLYLMVTLFDRYLSLVPIK 422

Query: 187  TNEIQLVGLTALLLASKYEDFWHPKVNELIAITDDSYTRLQMLSMEKLILKKLMFRLNTP 366
             N++QLVGLTALLLASKYEDFWHP+V +LI+I+ +SYTR QML MEK++L KL FRLN P
Sbjct: 423  KNDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKVVLNKLKFRLNVP 482

Query: 367  TPYVFMLRFLKAAQSDKKLEHLAFYLIELCLTEYEALKFRSSLLCPSAIYVARCTLQMSP 546
            TPYVFM+RFLKAAQSDK+LEHLAFYLIELCL EYEALK++ SLLC SAIY+ARCTLQ +P
Sbjct: 483  TPYVFMMRFLKAAQSDKRLEHLAFYLIELCLVEYEALKYKPSLLCASAIYLARCTLQRAP 542

Query: 547  AWTPLLCKHAHYEESELRDCAEMILRFHKASSKGPLKVTYGKYICESYLCVAKIKALDRL 726
            AWTPLL KHA YEES++RDCAEMIL+F KA+  G LKVTY KY+      VA I  L+RL
Sbjct: 543  AWTPLLHKHARYEESQIRDCAEMILKFQKAARTGQLKVTYEKYMRPDQSGVAAITPLNRL 602

Query: 727  PQ 732
            P+
Sbjct: 603  PR 604


>ref|XP_003530394.1| PREDICTED: putative cyclin-B3-1-like [Glycine max]
          Length = 562

 Score =  337 bits (865), Expect = 2e-90
 Identities = 163/241 (67%), Positives = 201/241 (83%)
 Frame = +1

Query: 7    EAQYPSLSNYMNSQTNLTPKMRGILINWLIEVHSKFGLMQETLFLMVAVFDRFVSVVTIQ 186
            EA  P L+NYM+ QT+++P +RGILINWLIEVH KF LM ETL+L V + D+++S+VTI+
Sbjct: 311  EAHNPLLANYMSIQTDISPHLRGILINWLIEVHFKFDLMPETLYLTVTLLDQYLSLVTIK 370

Query: 187  TNEIQLVGLTALLLASKYEDFWHPKVNELIAITDDSYTRLQMLSMEKLILKKLMFRLNTP 366
              ++QLVGLTALLLASKYEDFWHP+V +LI+I+ +SYTR QML MEKLIL+KL FRLN P
Sbjct: 371  KTDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLKFRLNAP 430

Query: 367  TPYVFMLRFLKAAQSDKKLEHLAFYLIELCLTEYEALKFRSSLLCPSAIYVARCTLQMSP 546
            TPYVFM+RFLKAAQSDKKLEH+AF+L++LCL EYEAL F+ SLLC SA+YVARCTLQ++P
Sbjct: 431  TPYVFMVRFLKAAQSDKKLEHMAFFLVDLCLVEYEALAFKPSLLCASALYVARCTLQITP 490

Query: 547  AWTPLLCKHAHYEESELRDCAEMILRFHKASSKGPLKVTYGKYICESYLCVAKIKALDRL 726
             WTPLL KHA YE S++RDCA+MIL+FHKA+  G LKV Y KY  +    VA +K LD+L
Sbjct: 491  PWTPLLHKHARYEVSQIRDCADMILKFHKAAGVGKLKVIYEKYSRQELSRVAAVKPLDKL 550

Query: 727  P 729
            P
Sbjct: 551  P 551


>ref|XP_002311288.1| predicted protein [Populus trichocarpa] gi|222851108|gb|EEE88655.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  335 bits (859), Expect = 9e-90
 Identities = 166/243 (68%), Positives = 197/243 (81%)
 Frame = +1

Query: 1   LMEAQYPSLSNYMNSQTNLTPKMRGILINWLIEVHSKFGLMQETLFLMVAVFDRFVSVVT 180
           ++E Q  SL NYM  QT++TP+MRGI+INWLIEVH KF LM ETL+LMV + DR++S   
Sbjct: 90  ILEVQNSSLENYMAIQTDITPQMRGIVINWLIEVHFKFELMPETLYLMVTLLDRYLSQAQ 149

Query: 181 IQTNEIQLVGLTALLLASKYEDFWHPKVNELIAITDDSYTRLQMLSMEKLILKKLMFRLN 360
           I+ NE+QLVGLTAL LASKYEDFWHP++ +LI+I+ +SY+R QML MEKL+LKKL FRLN
Sbjct: 150 IKKNELQLVGLTALFLASKYEDFWHPRIKDLISISAESYSRDQMLLMEKLLLKKLKFRLN 209

Query: 361 TPTPYVFMLRFLKAAQSDKKLEHLAFYLIELCLTEYEALKFRSSLLCPSAIYVARCTLQM 540
            PTPYVFMLRFLKAAQS+ KLEHLAFYLIELCL EY+ALKF+ S+LC SAIYVAR TLQM
Sbjct: 210 EPTPYVFMLRFLKAAQSEMKLEHLAFYLIELCLVEYKALKFKPSMLCASAIYVARSTLQM 269

Query: 541 SPAWTPLLCKHAHYEESELRDCAEMILRFHKASSKGPLKVTYGKYICESYLCVAKIKALD 720
            PAWTPLL +HAHY+ S++RDCAEMILRF KA+    L+VTY KY+      VA IK L 
Sbjct: 270 VPAWTPLLARHAHYQVSQMRDCAEMILRFQKAARTSQLRVTYEKYMRPDLSGVAAIKPLS 329

Query: 721 RLP 729
            LP
Sbjct: 330 ELP 332


>ref|XP_002316151.1| predicted protein [Populus trichocarpa] gi|222865191|gb|EEF02322.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  330 bits (847), Expect = 2e-88
 Identities = 164/243 (67%), Positives = 196/243 (80%)
 Frame = +1

Query: 1   LMEAQYPSLSNYMNSQTNLTPKMRGILINWLIEVHSKFGLMQETLFLMVAVFDRFVSVVT 180
           ++E Q   L NYM   T +TP+MRGI+INWLIEVH KF LM ETL+LMV + DR++S V 
Sbjct: 90  VLEVQNLCLENYMAIHTEITPQMRGIVINWLIEVHFKFELMPETLYLMVTLLDRYLSQVE 149

Query: 181 IQTNEIQLVGLTALLLASKYEDFWHPKVNELIAITDDSYTRLQMLSMEKLILKKLMFRLN 360
           I+ +E+QLVGLTALLLASKYEDFWHP++ +LI+I+ +SYTR QML MEK  LKKL FRLN
Sbjct: 150 IKKSELQLVGLTALLLASKYEDFWHPRIKDLISISAESYTRGQMLVMEKFFLKKLKFRLN 209

Query: 361 TPTPYVFMLRFLKAAQSDKKLEHLAFYLIELCLTEYEALKFRSSLLCPSAIYVARCTLQM 540
            PTPYVFMLRFLKAAQ+D+KLEHLAFYLIELCL EY+ALKF+ S+LC SAIYVAR TLQ+
Sbjct: 210 EPTPYVFMLRFLKAAQTDQKLEHLAFYLIELCLVEYKALKFKPSMLCASAIYVARSTLQV 269

Query: 541 SPAWTPLLCKHAHYEESELRDCAEMILRFHKASSKGPLKVTYGKYICESYLCVAKIKALD 720
           SPAWTPLL +H HY+ S++RDCAEMILRF KA+    L+VTY KY+      VA IK L+
Sbjct: 270 SPAWTPLLTRHTHYQVSQIRDCAEMILRFQKAARTSQLRVTYEKYMRPDLSGVAAIKPLN 329

Query: 721 RLP 729
            LP
Sbjct: 330 ELP 332


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