BLASTX nr result

ID: Coptis24_contig00030538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030538
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607856.1| Protein argonaute [Medicago truncatula] gi|3...   229   2e-58
ref|XP_002520550.1| eukaryotic translation initiation factor 2c,...   228   3e-58
ref|XP_003594459.1| Protein argonaute [Medicago truncatula] gi|3...   223   9e-57
ref|XP_002332150.1| argonaute protein group [Populus trichocarpa...   223   9e-57
ref|XP_003556681.1| PREDICTED: protein argonaute 2-like [Glycine...   221   6e-56

>ref|XP_003607856.1| Protein argonaute [Medicago truncatula] gi|355508911|gb|AES90053.1|
            Protein argonaute [Medicago truncatula]
          Length = 977

 Score =  229 bits (584), Expect = 2e-58
 Identities = 101/144 (70%), Positives = 126/144 (87%)
 Frame = +3

Query: 6    DNQFDMVLNEELTGVKNAFKSDGYFPTITVVVAQKRHQTRLFPENVREVPPNGNVFPGTV 185
            ++QF MVL EEL  +K  F+   YFPTIT++VAQKRHQTRLFP  VRE  P+GNVFPGTV
Sbjct: 785  ESQFHMVLGEELKDLKTVFQHSNYFPTITLIVAQKRHQTRLFPAGVREGAPSGNVFPGTV 844

Query: 186  VDTKIVNPHDYDFYICTHFGSLGTSRPTHYTVLYDDHGFTSDEMQRLIYNLCYTFARCTK 365
            VDTK+V+P ++DFY+C+H+GSLGTS+PTHY VL+D+H FTSD +Q+LIY++C+TFARCTK
Sbjct: 845  VDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDNLQKLIYDMCFTFARCTK 904

Query: 366  PVSLVPPVYYADLVAYRGRLYHDS 437
            PVSLVPPVYYADL AYRGRLY+++
Sbjct: 905  PVSLVPPVYYADLAAYRGRLYYEA 928


>ref|XP_002520550.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540264|gb|EEF41836.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 492

 Score =  228 bits (582), Expect = 3e-58
 Identities = 103/147 (70%), Positives = 130/147 (88%)
 Frame = +3

Query: 6   DNQFDMVLNEELTGVKNAFKSDGYFPTITVVVAQKRHQTRLFPENVREVPPNGNVFPGTV 185
           + QFDMVLNEEL  +K AF+S  Y PT+T++VAQKRHQTRLFP    +   NGNV PGTV
Sbjct: 304 EGQFDMVLNEELIDLKRAFQSVNYTPTVTLIVAQKRHQTRLFPAR-SDGSSNGNVTPGTV 362

Query: 186 VDTKIVNPHDYDFYICTHFGSLGTSRPTHYTVLYDDHGFTSDEMQRLIYNLCYTFARCTK 365
           VDTKIV+P ++DFY+C+H+GSLGTS+PTHY VL+D+HGF+SD++Q+LIYN+CYTFARCTK
Sbjct: 363 VDTKIVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHGFSSDQLQKLIYNMCYTFARCTK 422

Query: 366 PVSLVPPVYYADLVAYRGRLYHDSLLE 446
           PVSLVPPVYYADLVAYRGRLY++++++
Sbjct: 423 PVSLVPPVYYADLVAYRGRLYYEAVMD 449


>ref|XP_003594459.1| Protein argonaute [Medicago truncatula] gi|355483507|gb|AES64710.1|
            Protein argonaute [Medicago truncatula]
          Length = 1038

 Score =  223 bits (569), Expect = 9e-57
 Identities = 98/142 (69%), Positives = 124/142 (87%)
 Frame = +3

Query: 12   QFDMVLNEELTGVKNAFKSDGYFPTITVVVAQKRHQTRLFPENVREVPPNGNVFPGTVVD 191
            QFDMVLNEEL  +K AF+   YFPTIT++VAQKRHQTR FP++ R+   +GN+ PGTVVD
Sbjct: 852  QFDMVLNEELLDLKRAFQRLNYFPTITLIVAQKRHQTRFFPDSWRDGSSSGNILPGTVVD 911

Query: 192  TKIVNPHDYDFYICTHFGSLGTSRPTHYTVLYDDHGFTSDEMQRLIYNLCYTFARCTKPV 371
            TK+ +P ++DFY+C+++GSLGTS+PTHY VL+D+H FTSDE+Q+LIY +C+TFARCTKPV
Sbjct: 912  TKVTHPFEFDFYLCSYYGSLGTSKPTHYHVLWDEHKFTSDELQKLIYEMCFTFARCTKPV 971

Query: 372  SLVPPVYYADLVAYRGRLYHDS 437
            SLVPPVYYADL AYRGRLYH++
Sbjct: 972  SLVPPVYYADLAAYRGRLYHEA 993


>ref|XP_002332150.1| argonaute protein group [Populus trichocarpa]
            gi|222875200|gb|EEF12331.1| argonaute protein group
            [Populus trichocarpa]
          Length = 1020

 Score =  223 bits (569), Expect = 9e-57
 Identities = 102/147 (69%), Positives = 129/147 (87%)
 Frame = +3

Query: 6    DNQFDMVLNEELTGVKNAFKSDGYFPTITVVVAQKRHQTRLFPENVREVPPNGNVFPGTV 185
            + QFDMVLN+EL  +K AF+S  Y PTIT++VAQKRHQTRLF E+   +   GNV PGTV
Sbjct: 834  EGQFDMVLNDELMDIKRAFRSIMYTPTITLIVAQKRHQTRLFLEDGGRI---GNVSPGTV 890

Query: 186  VDTKIVNPHDYDFYICTHFGSLGTSRPTHYTVLYDDHGFTSDEMQRLIYNLCYTFARCTK 365
            VDTKIV+P +YDFY+C+H+GSLGTS+PTHY VL+D+HG +SD++Q+LIY++C+TFARCTK
Sbjct: 891  VDTKIVHPFEYDFYLCSHYGSLGTSKPTHYHVLWDEHGLSSDQLQKLIYDMCFTFARCTK 950

Query: 366  PVSLVPPVYYADLVAYRGRLYHDSLLE 446
            PVSLVPPVYYADLVAYRGRLYH++++E
Sbjct: 951  PVSLVPPVYYADLVAYRGRLYHEAVME 977


>ref|XP_003556681.1| PREDICTED: protein argonaute 2-like [Glycine max]
          Length = 966

 Score =  221 bits (562), Expect = 6e-56
 Identities = 96/145 (66%), Positives = 124/145 (85%)
 Frame = +3

Query: 6    DNQFDMVLNEELTGVKNAFKSDGYFPTITVVVAQKRHQTRLFPENVREVPPNGNVFPGTV 185
            ++QF MVL EEL  +K+ F    YFPTIT++VAQKRHQTR FP   ++   NGNVFPGTV
Sbjct: 774  ESQFHMVLTEELQDLKSVFSDANYFPTITIIVAQKRHQTRFFPVGPKDGIQNGNVFPGTV 833

Query: 186  VDTKIVNPHDYDFYICTHFGSLGTSRPTHYTVLYDDHGFTSDEMQRLIYNLCYTFARCTK 365
            VDTK+V+P ++DFY+C+H+GSLGTS+PTHY VL+D+H F SD++Q+LIY++C+TFARCTK
Sbjct: 834  VDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHKFNSDDLQKLIYDMCFTFARCTK 893

Query: 366  PVSLVPPVYYADLVAYRGRLYHDSL 440
            PVSLVPPVYYADL AYRGRLY++++
Sbjct: 894  PVSLVPPVYYADLTAYRGRLYYEAM 918


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