BLASTX nr result

ID: Coptis24_contig00030528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030528
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive tran...   152   2e-35
emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]   152   2e-35
ref|XP_002311259.1| AP2 domain-containing transcription factor [...   152   3e-35
ref|XP_002514802.1| Protein AINTEGUMENTA, putative [Ricinus comm...   147   9e-34
ref|XP_003631862.1| PREDICTED: LOW QUALITY PROTEIN: AP2-like eth...   141   6e-32

>ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive transcription factor BBM-like
            [Vitis vinifera]
          Length = 730

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/151 (51%), Positives = 104/151 (68%), Gaps = 9/151 (5%)
 Frame = +2

Query: 2    LDSSSMEHSTGSNSVIYXXXXXXXXXXXC------SYQGVMGGNQGGYVMPMGMILSDQG 163
            +DSSSM+HS+GSNSVIY                  S+QGV  GN  G+VMP+  +++ +G
Sbjct: 580  MDSSSMDHSSGSNSVIYSGGGAADGSAATGGSGSGSFQGVGYGNNIGFVMPISTVIAHEG 639

Query: 164  NHNQGSS-YGDNDVKQLGYDSILASSDPYQSRNSYYLSQQSPPTGMLK-SNGYDQGSACN 337
             H QG+  +GD++VK +GYD++  S+DPY +R+ YYLSQQS   GM+K S+ YDQGS CN
Sbjct: 640  GHGQGNGGFGDSEVKAIGYDNMFGSTDPYHARSLYYLSQQSS-AGMVKGSSAYDQGSGCN 698

Query: 338  NWMPTAVQAL-PRSSNLGVCHAAPAFTVWND 427
            NW+PTAV  L PR+++L VCH  P FTVWND
Sbjct: 699  NWVPTAVPTLAPRTNSLAVCHGTPTFTVWND 729


>emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]
          Length = 731

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/151 (51%), Positives = 104/151 (68%), Gaps = 9/151 (5%)
 Frame = +2

Query: 2    LDSSSMEHSTGSNSVIYXXXXXXXXXXXC------SYQGVMGGNQGGYVMPMGMILSDQG 163
            +DSSSM+HS+GSNSVIY                  S+QGV  GN  G+VMP+  +++ +G
Sbjct: 581  MDSSSMDHSSGSNSVIYSGGGAADGSAATGGSGSGSFQGVGYGNNIGFVMPISTVIAHEG 640

Query: 164  NHNQGSS-YGDNDVKQLGYDSILASSDPYQSRNSYYLSQQSPPTGMLK-SNGYDQGSACN 337
             H QG+  +GD++VK +GYD++  S+DPY +R+ YYLSQQS   GM+K S+ YDQGS CN
Sbjct: 641  GHGQGNGGFGDSEVKAIGYDNMFGSTDPYHARSLYYLSQQSS-AGMVKGSSAYDQGSGCN 699

Query: 338  NWMPTAVQAL-PRSSNLGVCHAAPAFTVWND 427
            NW+PTAV  L PR+++L VCH  P FTVWND
Sbjct: 700  NWVPTAVPTLAPRTNSLAVCHGTPTFTVWND 730


>ref|XP_002311259.1| AP2 domain-containing transcription factor [Populus trichocarpa]
            gi|222851079|gb|EEE88626.1| AP2 domain-containing
            transcription factor [Populus trichocarpa]
          Length = 718

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/147 (50%), Positives = 104/147 (70%), Gaps = 4/147 (2%)
 Frame = +2

Query: 2    LDSSSMEHSTGSNSVIYXXXXXXXXXXXC--SYQGVMGGNQGGYVMPMGMILSDQGN-HN 172
            ++SSSMEHS+GS+SV+Y              SYQG+  G+  GY +PM  ++++  N  +
Sbjct: 572  MESSSMEHSSGSDSVMYSSGGHDGTGTGTNGSYQGIGYGSNTGYAIPMATVIANDVNTQD 631

Query: 173  QGSSYGDNDVKQLGYDSILASSDPYQSRNSYYLSQQSPPTGMLKSNGYDQGSACNNWMPT 352
            QG+ YGD +VK LGY+++ +SSDPY +RN YYLSQQS   G++K++ YDQGS CNNW+PT
Sbjct: 632  QGNGYGDGEVKALGYENMFSSSDPYHARNLYYLSQQS-SAGVIKASAYDQGSTCNNWLPT 690

Query: 353  AVQAL-PRSSNLGVCHAAPAFTVWNDA 430
            AV  +  RS+N+ VCH AP FTVWN++
Sbjct: 691  AVPTIAARSNNMAVCHGAPTFTVWNES 717


>ref|XP_002514802.1| Protein AINTEGUMENTA, putative [Ricinus communis]
            gi|223545853|gb|EEF47356.1| Protein AINTEGUMENTA,
            putative [Ricinus communis]
          Length = 729

 Score =  147 bits (371), Expect = 9e-34
 Identities = 76/151 (50%), Positives = 100/151 (66%), Gaps = 9/151 (5%)
 Frame = +2

Query: 2    LDSSSMEHSTGSNSVIYXXXXXXXXXXXCSYQGVMGGNQGG--YVMPMGMILS----DQG 163
            +DSSSMEHS+GSNSV+Y            S QG+  G+ GG  Y +P+  +++    D G
Sbjct: 581  MDSSSMEHSSGSNSVMYSNGGGGHDG---SNQGMGYGSNGGGGYAIPLATVIANNSNDDG 637

Query: 164  NHNQGSSYGDNDVKQLGYDSILASSDPYQSRNSYYLSQQSPPT--GMLKSNGYDQGSACN 337
            N NQG  +GD +VK LGY+++  SSDPY +RN YYL QQS  +  G +K++ YDQGS CN
Sbjct: 638  NQNQGIGFGDGEVKALGYENMYGSSDPYHARNLYYLPQQSSSSSGGAVKASAYDQGSTCN 697

Query: 338  NWMPTAVQAL-PRSSNLGVCHAAPAFTVWND 427
            NW+P AV  + PRS+N+ VCH A  FTVWND
Sbjct: 698  NWVPAAVPTIAPRSNNMAVCHGASTFTVWND 728


>ref|XP_003631862.1| PREDICTED: LOW QUALITY PROTEIN: AP2-like ethylene-responsive
           transcription factor BBM-like [Vitis vinifera]
          Length = 519

 Score =  141 bits (355), Expect = 6e-32
 Identities = 75/149 (50%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
 Frame = +2

Query: 2   LDSSSMEHSTGSNSVIYXXXXXXXXXXXC-----SYQGVMGGNQGGYVMPMGMILSDQGN 166
           +DSSSM+HS+GSNSVIY                 S+QGV  G+  G+VMP+  +++ + +
Sbjct: 375 MDSSSMKHSSGSNSVIYSGGGAADGSAATGGGSGSFQGVGYGSNIGFVMPISTVIAHESS 434

Query: 167 HNQGS-SYGDNDVKQLGYDSILASSDPYQSRNSYYLSQQSPPTGMLK-SNGYDQGSACNN 340
           H QG+ S+GD+ VK +GYD+I  S+DPY +R+ YYLSQQS   GM+K S+ YDQGS C N
Sbjct: 435 HGQGNGSFGDSKVKAIGYDNIFGSTDPYHARSLYYLSQQSS-AGMVKGSSAYDQGSGCTN 493

Query: 341 WMPTAVQALPRSSNLGVCHAAPAFTVWND 427
           W+P    AL   +N+ VCH APAFTVWND
Sbjct: 494 WVP----ALVPXNNMAVCHGAPAFTVWND 518


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