BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030523
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...    63   3e-08
ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07
emb|CBI31329.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06

>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/58 (55%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -3

Query: 427 KAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAKL 257
           KA ++IT MPYRP+ AM ATLV A RI+GNT I +WA  K+LE++PE+  +++LIA +
Sbjct: 536 KAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANM 593


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = -3

Query: 427 KAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAKL 257
           KA ++IT MPYRPS AM ATL+ A RI+GN  I +WA  K+LE+RPE+  +++LIA +
Sbjct: 587 KAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANM 644


>ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
           gi|449481506|ref|XP_004156203.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -3

Query: 427 KAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAKL 257
           KA +IIT MPYRP+ A+ ATL+ A  I+GN  I +WA  K+LE+RPE   +++LIA +
Sbjct: 573 KAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANM 630


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -3

Query: 427 KAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAKL 257
           KA +II  MPY+P+ AM ATL+ A RI+ NT I +WA  K+LE++PE+  +++LIA +
Sbjct: 549 KAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANM 606


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -3

Query: 427 KAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KMLEVRPED*IHHLLIAKL 257
           KA +II  MPY+P+ AM ATL+ A RI+ NT I +WA  K+LE++PE+  +++LIA +
Sbjct: 594 KAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANM 651