BLASTX nr result

ID: Coptis24_contig00030499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030499
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29723.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002529000.1| hypothetical protein RCOM_1374370 [Ricinus c...    60   1e-07
ref|XP_004135525.1| PREDICTED: uncharacterized protein LOC101222...    56   3e-06
ref|XP_003592935.1| hypothetical protein MTR_2g005910 [Medicago ...    55   4e-06
ref|XP_002325777.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>emb|CBI29723.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = +1

Query: 37  MDTQEPNHFGINNEHYSMVDTSRPFRSVKEAVEIFGERILAGDLYSTKPLNTSAYQTPLP 216
           M+T + +H   N  H+S VDTSRPFRSVKEAV IFGER+LAG+L+S KP     +++P  
Sbjct: 1   METPQLSH-APNTNHHSSVDTSRPFRSVKEAVAIFGERLLAGELHSPKPF-YHKHESPPR 58

Query: 217 SPRPTLSVIPKQLVRNE 267
           +P+  +    ++L  NE
Sbjct: 59  TPQAIIRYDDRELKDNE 75


>ref|XP_002529000.1| hypothetical protein RCOM_1374370 [Ricinus communis]
           gi|223531540|gb|EEF33370.1| hypothetical protein
           RCOM_1374370 [Ricinus communis]
          Length = 246

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/54 (61%), Positives = 38/54 (70%)
 Frame = +1

Query: 70  NNEHYSMVDTSRPFRSVKEAVEIFGERILAGDLYSTKPLNTSAYQTPLPSPRPT 231
           N ++ S+VDTSRPFRSVKEAV IFGERIL  ++YS KP     Y TP   P PT
Sbjct: 13  NRDYSSLVDTSRPFRSVKEAVAIFGERILVREIYSPKP-----YYTP---PTPT 58


>ref|XP_004135525.1| PREDICTED: uncharacterized protein LOC101222858 [Cucumis sativus]
           gi|449503325|ref|XP_004161946.1| PREDICTED:
           uncharacterized LOC101222858 [Cucumis sativus]
          Length = 220

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +1

Query: 85  SMVDTSRPFRSVKEAVEIFGERILAGDLYSTKPLNTSAYQTPLP 216
           S VDTSRPFRSVKEAV +FGER+L GD YS+ P  ++    PLP
Sbjct: 13  SAVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPST--DAPLP 54


>ref|XP_003592935.1| hypothetical protein MTR_2g005910 [Medicago truncatula]
           gi|355481983|gb|AES63186.1| hypothetical protein
           MTR_2g005910 [Medicago truncatula]
          Length = 238

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/68 (47%), Positives = 40/68 (58%)
 Frame = +1

Query: 49  EPNHFGINNEHYSMVDTSRPFRSVKEAVEIFGERILAGDLYSTKPLNTSAYQTPLPSPRP 228
           EP       ++ S VDTSRPF SVKEAV IFGER+L G++YS  P   S   T   +P  
Sbjct: 4   EPMSVTPTADYSSTVDTSRPFSSVKEAVAIFGERLLVGEIYSPSPKPFSFSDTSSTAPYY 63

Query: 229 TLSVIPKQ 252
           + SV  K+
Sbjct: 64  SPSVTIKR 71


>ref|XP_002325777.1| predicted protein [Populus trichocarpa] gi|222862652|gb|EEF00159.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +1

Query: 76  EHYSMVDTSRPFRSVKEAVEIFGERILAGDLYSTKP 183
           ++ S VDTSRPFRSVKEAV IFG+R L G++YS+KP
Sbjct: 13  DYSSSVDTSRPFRSVKEAVAIFGKRFLVGEIYSSKP 48


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