BLASTX nr result

ID: Coptis24_contig00030481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030481
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
emb|CBI17696.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like...    95   5e-18
ref|XP_002526929.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_004145719.1| PREDICTED: uncharacterized protein LOC101209...    87   1e-15

>ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|222847339|gb|EEE84886.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/90 (54%), Positives = 58/90 (64%)
 Frame = -3

Query: 271 DIKEQVVKTSREEDCNTKRIECNTDGIKESVVEGGGDLNGQNSSISLKGSALPCMNRLRE 92
           D +E++V    E+     RI      + E    GG  L   N   S   SALPCM++LRE
Sbjct: 672 DEEEELVMKESEKKKTEPRI-----AVDEENKLGGDKLAKDNPDASCSNSALPCMDKLRE 726

Query: 91  ELSCAICLDICFEPSTTSCGHSFCKKCLKS 2
           ELSCAICL+ICFEPSTTSCGHSFCKKCL+S
Sbjct: 727 ELSCAICLEICFEPSTTSCGHSFCKKCLRS 756


>emb|CBI17696.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 EEDCNTKRIECNTDGIKESVVEG----GGDLNGQNSSISLKGSALPCMNRLREELSCAIC 71
           +E+   K+IE  T   +E  V G    G + +  + S S   S LPCM+RLREELSCAIC
Sbjct: 721 KEESEKKKIETKTAEHEEKNVTGDKQQGAESSAASCSASTSTSVLPCMDRLREELSCAIC 780

Query: 70  LDICFEPSTTSCGHSFCKKCLKS 2
           L+ICFEPSTT CGHSFCKKCL+S
Sbjct: 781 LEICFEPSTTPCGHSFCKKCLRS 803


>ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 908

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 EEDCNTKRIECNTDGIKESVVEG----GGDLNGQNSSISLKGSALPCMNRLREELSCAIC 71
           +E+   K+IE  T   +E  V G    G + +  + S S   S LPCM+RLREELSCAIC
Sbjct: 675 KEESEKKKIETKTAEHEEKNVTGDKQQGAESSAASCSASTSTSVLPCMDRLREELSCAIC 734

Query: 70  LDICFEPSTTSCGHSFCKKCLKS 2
           L+ICFEPSTT CGHSFCKKCL+S
Sbjct: 735 LEICFEPSTTPCGHSFCKKCLRS 757


>ref|XP_002526929.1| conserved hypothetical protein [Ricinus communis]
           gi|223533681|gb|EEF35416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 400

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = -3

Query: 238 EEDCNTKRIECNTDGIKESVVEGGGD-LNGQNSSISLKGSALPCMNRLREELSCAICLDI 62
           +E+   ++ E     I+  +++   D L  ++S +S   S LPCM++LREELSCAICL+I
Sbjct: 100 DEEEEPRKQEIQKVKIEPEIIDTEEDELKKESSGVSCSNSGLPCMDKLREELSCAICLEI 159

Query: 61  CFEPSTTSCGHSFCKKCLKS 2
           C+EPSTTSCGHSFCKKCL+S
Sbjct: 160 CYEPSTTSCGHSFCKKCLRS 179


>ref|XP_004145719.1| PREDICTED: uncharacterized protein LOC101209296 [Cucumis sativus]
          Length = 382

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/62 (66%), Positives = 48/62 (77%)
 Frame = -3

Query: 187 ESVVEGGGDLNGQNSSISLKGSALPCMNRLREELSCAICLDICFEPSTTSCGHSFCKKCL 8
           +S+VE   D +      SL  S LPCM++LREELSCAICL+ICFEPSTT CGHSFCKKCL
Sbjct: 123 DSMVEQKADAS------SLTSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCL 176

Query: 7   KS 2
           +S
Sbjct: 177 RS 178


Top