BLASTX nr result
ID: Coptis24_contig00030477
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030477 (279 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23583.3| unnamed protein product [Vitis vinifera] 55 4e-06 ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a... 55 4e-06 emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] 55 4e-06 >emb|CBI23583.3| unnamed protein product [Vitis vinifera] Length = 1287 Score = 55.5 bits (132), Expect = 4e-06 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Frame = +1 Query: 34 VDQYQPKRPKNEPDDVTGLKTNYFSSYRLSQ-NTSPASVKEEKKPVVNNL-DDGEFPDEP 207 V + P++P N + T F Y Q N + K E +PV + L +DG+FP+EP Sbjct: 271 VPYHNPQKPFNVKKE-----TAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEP 325 Query: 208 DWLLVGRSTVAGLSTCRGKKLEFN 279 DW LVGR+ + GLST +G+KL N Sbjct: 326 DWFLVGRTPIIGLSTTKGRKLVDN 349 >ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3-like [Vitis vinifera] Length = 1224 Score = 55.5 bits (132), Expect = 4e-06 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Frame = +1 Query: 34 VDQYQPKRPKNEPDDVTGLKTNYFSSYRLSQ-NTSPASVKEEKKPVVNNL-DDGEFPDEP 207 V + P++P N + T F Y Q N + K E +PV + L +DG+FP+EP Sbjct: 271 VPYHNPQKPFNVKKE-----TAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEP 325 Query: 208 DWLLVGRSTVAGLSTCRGKKLEFN 279 DW LVGR+ + GLST +G+KL N Sbjct: 326 DWFLVGRTPIIGLSTTKGRKLVDN 349 >emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] Length = 1249 Score = 55.5 bits (132), Expect = 4e-06 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Frame = +1 Query: 34 VDQYQPKRPKNEPDDVTGLKTNYFSSYRLSQ-NTSPASVKEEKKPVVNNL-DDGEFPDEP 207 V + P++P N + T F Y Q N + K E +PV + L +DG+FP+EP Sbjct: 271 VPYHNPQKPFNVKKE-----TAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEP 325 Query: 208 DWLLVGRSTVAGLSTCRGKKLEFN 279 DW LVGR+ + GLST +G+KL N Sbjct: 326 DWFLVGRTPIIGLSTTKGRKLVDN 349