BLASTX nr result

ID: Coptis24_contig00030477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030477
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23583.3| unnamed protein product [Vitis vinifera]               55   4e-06
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...    55   4e-06
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]    55   4e-06

>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +1

Query: 34  VDQYQPKRPKNEPDDVTGLKTNYFSSYRLSQ-NTSPASVKEEKKPVVNNL-DDGEFPDEP 207
           V  + P++P N   +     T  F  Y   Q N +    K E +PV + L +DG+FP+EP
Sbjct: 271 VPYHNPQKPFNVKKE-----TAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEP 325

Query: 208 DWLLVGRSTVAGLSTCRGKKLEFN 279
           DW LVGR+ + GLST +G+KL  N
Sbjct: 326 DWFLVGRTPIIGLSTTKGRKLVDN 349


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Vitis vinifera]
          Length = 1224

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +1

Query: 34  VDQYQPKRPKNEPDDVTGLKTNYFSSYRLSQ-NTSPASVKEEKKPVVNNL-DDGEFPDEP 207
           V  + P++P N   +     T  F  Y   Q N +    K E +PV + L +DG+FP+EP
Sbjct: 271 VPYHNPQKPFNVKKE-----TAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEP 325

Query: 208 DWLLVGRSTVAGLSTCRGKKLEFN 279
           DW LVGR+ + GLST +G+KL  N
Sbjct: 326 DWFLVGRTPIIGLSTTKGRKLVDN 349


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +1

Query: 34  VDQYQPKRPKNEPDDVTGLKTNYFSSYRLSQ-NTSPASVKEEKKPVVNNL-DDGEFPDEP 207
           V  + P++P N   +     T  F  Y   Q N +    K E +PV + L +DG+FP+EP
Sbjct: 271 VPYHNPQKPFNVKKE-----TAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEP 325

Query: 208 DWLLVGRSTVAGLSTCRGKKLEFN 279
           DW LVGR+ + GLST +G+KL  N
Sbjct: 326 DWFLVGRTPIIGLSTTKGRKLVDN 349


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