BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030473
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310372.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07
ref|XP_002533339.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
ref|XP_002331642.1| predicted protein [Populus trichocarpa] gi|1...    57   2e-06

>ref|XP_002310372.1| predicted protein [Populus trichocarpa] gi|222853275|gb|EEE90822.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
 Frame = -3

Query: 377 CYTAIMDQRASKVTVD-----------DGKNRNYFRSFSQGNSSKPF---NFSVKSLLGL 240
           C ++IMD RA K+T +           + +   Y RS SQG+S +     +FS+ SLL L
Sbjct: 23  CSSSIMDVRARKITTNNPLATPPNTRVEKRKMEYNRSLSQGSSRRLLTASHFSLVSLLLL 82

Query: 239 VCLTASXXXXXXXXXXXXXXXXXXXXXPIGIFAVLMVLAFMPSDVRNITSSY 84
           VCLTAS                     PIGI  +LM LAFMPS+ R+IT ++
Sbjct: 83  VCLTASLLILPLVLPPLPPPPFMLLLLPIGILVLLMFLAFMPSNARDITYTW 134


>ref|XP_002533339.1| conserved hypothetical protein [Ricinus communis]
           gi|223526830|gb|EEF29048.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
 Frame = -3

Query: 323 KNRNYFRSFSQGNSSKPF----NFSVKSLLGLVCLTASXXXXXXXXXXXXXXXXXXXXXP 156
           K   Y RS SQG+S +       FS++SLL L+CLTAS                     P
Sbjct: 54  KKMEYQRSLSQGSSGRRLFPASYFSLESLLLLICLTASLLILPLILPPLPPPPFLLLLLP 113

Query: 155 IGIFAVLMVLAFMPSDVRNITSSYV 81
           IGI AVLM+LAFMP++ R+IT +YV
Sbjct: 114 IGILAVLMILAFMPANARDITYTYV 138


>ref|XP_002331642.1| predicted protein [Populus trichocarpa] gi|118487626|gb|ABK95638.1|
           unknown [Populus trichocarpa]
           gi|222874038|gb|EEF11169.1| predicted protein [Populus
           trichocarpa]
          Length = 107

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 13/107 (12%)
 Frame = -3

Query: 362 MDQRASKVTVD----------DGKNRNYFRSFSQGNSSKPF---NFSVKSLLGLVCLTAS 222
           MD RA K+T +          + K   Y RS SQG++ +     +FS+ SLL L+C+TAS
Sbjct: 1   MDVRARKITANNHRAPPNTSAEEKKIEYNRSLSQGSTRRLLTTSHFSLASLLLLMCITAS 60

Query: 221 XXXXXXXXXXXXXXXXXXXXXPIGIFAVLMVLAFMPSDVRNITSSYV 81
                                PIGI  VL+VLAFMPS+ R+IT +YV
Sbjct: 61  LLILPLVLAPLPPPPFMLLLLPIGILVVLIVLAFMPSNARDITFAYV 107