BLASTX nr result

ID: Coptis24_contig00030464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030464
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173149.1| PREDICTED: auxin-induced protein X10A-like [...   124   3e-26
ref|XP_002271529.2| PREDICTED: auxin-induced protein 10A5 [Vitis...   124   3e-26
ref|XP_004172954.1| PREDICTED: auxin-induced protein X10A-like [...   124   4e-26
ref|XP_004170628.1| PREDICTED: auxin-induced protein 6B-like [Cu...   124   4e-26
ref|XP_004162911.1| PREDICTED: auxin-induced protein X10A-like [...   122   1e-25

>ref|XP_004173149.1| PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]
          Length = 100

 Score =  124 bits (312), Expect = 3e-26
 Identities = 62/103 (60%), Positives = 83/103 (80%), Gaps = 5/103 (4%)
 Frame = +2

Query: 194 VGFHLPRVLHAKQILLQRATSI-----PVATDIPKGHLAVYVGENPIKKKRYVIPVSYLN 358
           +GF LPR++ AKQ L QR++S      P A D+PKG+ AVY+GE   +KKR+VIP+SYLN
Sbjct: 1   MGFRLPRIVTAKQSL-QRSSSTGNGASPKAVDVPKGYFAVYIGEE--QKKRFVIPLSYLN 57

Query: 359 QPSFQDLLSKAEKEYGYDHPMGGLTIPCSEEKFMNLTSHLNNN 487
           QPSFQDLLS+AE+E+GY+HPMGG+TIPC+E  F++LT  LN++
Sbjct: 58  QPSFQDLLSQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLNDS 100


>ref|XP_002271529.2| PREDICTED: auxin-induced protein 10A5 [Vitis vinifera]
          Length = 94

 Score =  124 bits (312), Expect = 3e-26
 Identities = 58/98 (59%), Positives = 77/98 (78%)
 Frame = +2

Query: 194 VGFHLPRVLHAKQILLQRATSIPVATDIPKGHLAVYVGENPIKKKRYVIPVSYLNQPSFQ 373
           +G HLP ++ AKQIL    +S     ++PKGH AVYVGE   +KKR+V+P+SYLN PSFQ
Sbjct: 1   MGIHLPSIVQAKQILKLSVSS--TTAEVPKGHFAVYVGET--EKKRFVVPISYLNNPSFQ 56

Query: 374 DLLSKAEKEYGYDHPMGGLTIPCSEEKFMNLTSHLNNN 487
            LLS AE+E+G++HPMGG+TIPC EE F++LTSHLN++
Sbjct: 57  KLLSHAEEEFGFNHPMGGVTIPCKEESFIDLTSHLNSS 94


>ref|XP_004172954.1| PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]
          Length = 100

 Score =  124 bits (310), Expect = 4e-26
 Identities = 61/103 (59%), Positives = 83/103 (80%), Gaps = 5/103 (4%)
 Frame = +2

Query: 194 VGFHLPRVLHAKQILLQRATSI-----PVATDIPKGHLAVYVGENPIKKKRYVIPVSYLN 358
           +GF LPR++ AKQ L QR++S      P A D+PKG+  VYVGE   +KKR+VIP+SYLN
Sbjct: 1   MGFRLPRIVTAKQSL-QRSSSTGNGESPKAVDVPKGYFTVYVGEE--QKKRFVIPLSYLN 57

Query: 359 QPSFQDLLSKAEKEYGYDHPMGGLTIPCSEEKFMNLTSHLNNN 487
           QPSFQDLLS++E+E+GY+HPMGG+TIPCSE+ F+++T  LN++
Sbjct: 58  QPSFQDLLSQSEEEFGYNHPMGGITIPCSEDCFLDVTERLNDS 100


>ref|XP_004170628.1| PREDICTED: auxin-induced protein 6B-like [Cucumis sativus]
          Length = 100

 Score =  124 bits (310), Expect = 4e-26
 Identities = 63/100 (63%), Positives = 79/100 (79%), Gaps = 5/100 (5%)
 Frame = +2

Query: 194 VGFHLPRVLHAKQILLQRATSI-----PVATDIPKGHLAVYVGENPIKKKRYVIPVSYLN 358
           +GF LPR++ +KQ L QR++S      P A D+PKG+  VYVGE   +KKR+VIP+SYLN
Sbjct: 1   MGFRLPRIVTSKQSL-QRSSSTGNGESPKAVDVPKGYFTVYVGEE--QKKRFVIPLSYLN 57

Query: 359 QPSFQDLLSKAEKEYGYDHPMGGLTIPCSEEKFMNLTSHL 478
           QPSFQDLLS+AE+E+GY+HPMGG+TIPCSEE F NLT  L
Sbjct: 58  QPSFQDLLSQAEEEFGYNHPMGGITIPCSEEIFQNLTQSL 97


>ref|XP_004162911.1| PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]
          Length = 100

 Score =  122 bits (307), Expect = 1e-25
 Identities = 61/103 (59%), Positives = 80/103 (77%), Gaps = 5/103 (4%)
 Frame = +2

Query: 194 VGFHLPRVLHAKQILLQRATSI-----PVATDIPKGHLAVYVGENPIKKKRYVIPVSYLN 358
           +GF LPR++ AKQ L QR++S      P   D+PKG+  VYVGE    KKR+VIP+SYLN
Sbjct: 1   MGFRLPRIVTAKQSL-QRSSSTGNGASPKVVDVPKGYFTVYVGEE--HKKRFVIPLSYLN 57

Query: 359 QPSFQDLLSKAEKEYGYDHPMGGLTIPCSEEKFMNLTSHLNNN 487
           QPSFQDLLS+AE+E+GY+HPMGG+TIPC E++F++LT  LN +
Sbjct: 58  QPSFQDLLSQAEEEFGYNHPMGGITIPCHEDEFLDLTQSLNES 100


Top