BLASTX nr result

ID: Coptis24_contig00030462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030462
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15484.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002276900.1| PREDICTED: uncharacterized protein LOC100259...   119   2e-25
ref|XP_002321484.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002276848.1| PREDICTED: uncharacterized protein LOC100242...   110   1e-22
ref|XP_002318542.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21

>emb|CBI15484.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/100 (57%), Positives = 73/100 (73%)
 Frame = -3

Query: 301 ALQIQAPELSKLELCFTKKLSLPVFTASKVEDEEKTPLQLTIADVQGNHRLPTRFSYPIK 122
           +L+IQA E S L+L FTK+LSLP+FT +K+   E +PLQL I +  G+  +PT   Y IK
Sbjct: 75  SLRIQALEASNLQLIFTKRLSLPIFTGTKIGYAENSPLQLHIVETSGDQMVPTTLPYSIK 134

Query: 121 VEIVVLDGDFVPGDCENWTSEYFDSKIVRERTGRRPLITG 2
           VEIVVLDGDF  GDC  W+S+ F+  IVRERTG+RPL+ G
Sbjct: 135 VEIVVLDGDFPQGDCNTWSSKEFEDNIVRERTGKRPLLAG 174


>ref|XP_002276900.1| PREDICTED: uncharacterized protein LOC100259493 [Vitis vinifera]
          Length = 487

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/100 (57%), Positives = 73/100 (73%)
 Frame = -3

Query: 301 ALQIQAPELSKLELCFTKKLSLPVFTASKVEDEEKTPLQLTIADVQGNHRLPTRFSYPIK 122
           +L+IQA E S L+L FTK+LSLP+FT +K+   E +PLQL I +  G+  +PT   Y IK
Sbjct: 93  SLRIQALEASNLQLIFTKRLSLPIFTGTKIGYAENSPLQLHIVETSGDQMVPTTLPYSIK 152

Query: 121 VEIVVLDGDFVPGDCENWTSEYFDSKIVRERTGRRPLITG 2
           VEIVVLDGDF  GDC  W+S+ F+  IVRERTG+RPL+ G
Sbjct: 153 VEIVVLDGDFPQGDCNTWSSKEFEDNIVRERTGKRPLLAG 192


>ref|XP_002321484.1| predicted protein [Populus trichocarpa] gi|222868480|gb|EEF05611.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/100 (51%), Positives = 72/100 (72%)
 Frame = -3

Query: 301 ALQIQAPELSKLELCFTKKLSLPVFTASKVEDEEKTPLQLTIADVQGNHRLPTRFSYPIK 122
           +LQI+A E S L+L ++K L LP+FT SK+ D + +PLQ+ + D +G+  +PT   +P+K
Sbjct: 49  SLQIKALEASSLQLMYSKSLLLPIFTGSKIVDLDSSPLQILLVDTRGDQMVPTYLPHPLK 108

Query: 121 VEIVVLDGDFVPGDCENWTSEYFDSKIVRERTGRRPLITG 2
           +E+VVLDGDF       WTSE FDS IV+ERTG+RPL+ G
Sbjct: 109 IEVVVLDGDFPSNGSSKWTSEEFDSNIVKERTGKRPLLAG 148


>ref|XP_002276848.1| PREDICTED: uncharacterized protein LOC100242382 [Vitis vinifera]
           gi|297734235|emb|CBI15482.3| unnamed protein product
           [Vitis vinifera]
          Length = 470

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 ALQIQAPELSKLELCFTKKLSLPVFTASKVEDEEKTPLQLTIADVQG-NHRLPTRFSYPI 125
           + +IQAPE S + L FTK LSLP+FT +K+ ++E  PLQL I D  G N  +    S+  
Sbjct: 74  SFRIQAPEPSTMRLTFTKNLSLPIFTGTKIVNDENKPLQLIIEDTSGDNQNILRALSHSF 133

Query: 124 KVEIVVLDGDFVPGDCENWTSEYFDSKIVRERTGRRPLITG 2
           KVEI+VLDGDF  GD ENW++E FD+ IV+ER G+RPL+ G
Sbjct: 134 KVEIIVLDGDFPGGDRENWSTEEFDNSIVKERAGKRPLLAG 174


>ref|XP_002318542.1| predicted protein [Populus trichocarpa] gi|222859215|gb|EEE96762.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/100 (50%), Positives = 71/100 (71%)
 Frame = -3

Query: 301 ALQIQAPELSKLELCFTKKLSLPVFTASKVEDEEKTPLQLTIADVQGNHRLPTRFSYPIK 122
           +L+IQ+ E S L+L F+K L LP+FT SK+ D + +PLQ+ + D +G+  + T   +PIK
Sbjct: 77  SLRIQSLEPSSLQLMFSKNLLLPIFTGSKIVDLDSSPLQILLVDTRGDQVVSTYLPHPIK 136

Query: 121 VEIVVLDGDFVPGDCENWTSEYFDSKIVRERTGRRPLITG 2
           +E+VVLDGDF   D   WTSE F+S IV+ER G+RPL+ G
Sbjct: 137 IEVVVLDGDFPSYDNRTWTSEEFNSNIVKERKGKRPLLAG 176


Top