BLASTX nr result

ID: Coptis24_contig00030454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030454
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27683.3| unnamed protein product [Vitis vinifera]              166   3e-39
ref|XP_002514886.1| conserved hypothetical protein [Ricinus comm...   156   2e-36
ref|XP_002271512.1| PREDICTED: uncharacterized protein LOC100266...   155   5e-36
ref|XP_002299323.1| predicted protein [Populus trichocarpa] gi|2...   155   5e-36
emb|CAN72196.1| hypothetical protein VITISV_014980 [Vitis vinifera]   155   5e-36

>emb|CBI27683.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  166 bits (420), Expect = 3e-39
 Identities = 99/204 (48%), Positives = 129/204 (63%), Gaps = 13/204 (6%)
 Frame = -3

Query: 573 VCPLQEYLFGSRVELPQLTTVAKKENRTSLGELFQKTRVGE-----EMGDNXXXXXXXXX 409
           VCPLQ YLFGS +ELP+ TTVAKKE+RTSLGELFQ+++        E G+          
Sbjct: 182 VCPLQGYLFGSAIELPETTTVAKKEHRTSLGELFQRSKEENSGAKCERGEKRTDKEADKS 241

Query: 408 XXXXXXKILKRMILGSSS-------AAADSIAVETKLNKLLQMFHRKVHPEDSTTPKKCS 250
                 K+LK+ +L +SS          DS + ETKL+K+L MFHRKVHPE ST  +K +
Sbjct: 242 AVHIMKKMLKKKMLHASSRNSTAAGGTVDSASAETKLHKILHMFHRKVHPESSTATEKPN 301

Query: 249 KPNKTDMKNHIPHDGGGSNYSREHTLPDEDSTTIHKISVSKDRV-RHKSHLNTPHVADTR 73
           +P+K ++KN I +DGG +N  R   LPDED     + ++SK+ + R+KS  N P      
Sbjct: 302 RPHKNEIKNGIFYDGGCNNGDR--MLPDEDIMIFPQRTLSKESIRRYKSQSNPPQFTLCG 359

Query: 72  SDSSGSGNREYWIKTDADYLVLEL 1
           +DS  +GNREYWIKTDADYLVLEL
Sbjct: 360 NDS--NGNREYWIKTDADYLVLEL 381


>ref|XP_002514886.1| conserved hypothetical protein [Ricinus communis]
           gi|223545937|gb|EEF47440.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 388

 Score =  156 bits (395), Expect = 2e-36
 Identities = 96/210 (45%), Positives = 122/210 (58%), Gaps = 19/210 (9%)
 Frame = -3

Query: 573 VCPLQEYLFGSRVELPQLTTVAKKENRTSLGELFQKTRVGE-------EMGDNXXXXXXX 415
           VCPLQ YLFGS +EL + TT AKKENRTSLGELFQ++++ E       E  +        
Sbjct: 187 VCPLQGYLFGSAIELSETTTAAKKENRTSLGELFQRSKIAEENFGGKYERDEKRMEKEAD 246

Query: 414 XXXXXXXXKILKRMIL--------GSSSAAADSIAVETKLNKLLQMFHRKVHPEDSTTPK 259
                   K+LK+ +L        GS     DS + ETKL+K+L MFHRKVHPE ST+ +
Sbjct: 247 KSAVHLMKKMLKKKMLHASSRNSTGSGGGTVDSASAETKLHKILHMFHRKVHPESSTSTQ 306

Query: 258 KCSKPNKTDMK---NHIPHDGGGSNYSREHTLPDEDSTTIHKISVSKDRV-RHKSHLNTP 91
           K  KP K D K   N+  H+ GG        LPDE+ T + + ++SK  + R+KS  N P
Sbjct: 307 KADKPQKNDNKKNANNAGHNNGG------QMLPDEEITVLPQRALSKRSIRRYKSQSNPP 360

Query: 90  HVADTRSDSSGSGNREYWIKTDADYLVLEL 1
               T S S  +G+RE WIKTDADYLVLEL
Sbjct: 361 QF--TLSSSESNGSRECWIKTDADYLVLEL 388


>ref|XP_002271512.1| PREDICTED: uncharacterized protein LOC100266157 [Vitis vinifera]
          Length = 428

 Score =  155 bits (392), Expect = 5e-36
 Identities = 93/198 (46%), Positives = 123/198 (62%), Gaps = 13/198 (6%)
 Frame = -3

Query: 573 VCPLQEYLFGSRVELPQLTTVAKKENRTSLGELFQKTRVGE-----EMGDNXXXXXXXXX 409
           VCPLQ YLFGS +ELP+ TTVAKKE+RTSLGELFQ+++        E G+          
Sbjct: 218 VCPLQGYLFGSAIELPETTTVAKKEHRTSLGELFQRSKEENSGAKCERGEKRTDKEADKS 277

Query: 408 XXXXXXKILKRMILGSSS-------AAADSIAVETKLNKLLQMFHRKVHPEDSTTPKKCS 250
                 K+LK+ +L +SS          DS + ETKL+K+L MFHRKVHPE ST  +K +
Sbjct: 278 AVHIMKKMLKKKMLHASSRNSTAAGGTVDSASAETKLHKILHMFHRKVHPESSTATEKPN 337

Query: 249 KPNKTDMKNHIPHDGGGSNYSREHTLPDEDSTTIHKISVSKDRV-RHKSHLNTPHVADTR 73
           +P+K ++KN I +DGG +N  R   LPDED     + ++SK+ + R+KS  N P      
Sbjct: 338 RPHKNEIKNGIFYDGGCNNGDR--MLPDEDIMIFPQRTLSKESIRRYKSQSNPPQFTLCG 395

Query: 72  SDSSGSGNREYWIKTDAD 19
           +DS  +GNREYWIKTDAD
Sbjct: 396 NDS--NGNREYWIKTDAD 411


>ref|XP_002299323.1| predicted protein [Populus trichocarpa] gi|222846581|gb|EEE84128.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  155 bits (392), Expect = 5e-36
 Identities = 98/207 (47%), Positives = 121/207 (58%), Gaps = 15/207 (7%)
 Frame = -3

Query: 576 AVCPLQEYLFGSRVELPQLTTVAKKENRTSLGELFQKTRVGE-------EMGDNXXXXXX 418
           AVCPLQ YLFGS +EL +   VAKKE+RTSLGELFQKT++ E       E  +       
Sbjct: 183 AVCPLQGYLFGSAIELSETAPVAKKEHRTSLGELFQKTKIAEENYGVKFEREEKRVEKEA 242

Query: 417 XXXXXXXXXKILKRMILGSSS--------AAADSIAVETKLNKLLQMFHRKVHPEDSTTP 262
                    KILK+ +L +SS        A  DS + ETKL+K+L MFHRKVHPE ST+ 
Sbjct: 243 DKSAVNLMKKILKKKMLHASSRSSTSAGGATVDSASAETKLHKILHMFHRKVHPESSTST 302

Query: 261 KKCSKPNKTDMKNHIPHDGGGSNYSREHTLPDEDSTTIHKISVSKDRVRHKSHLNTPHVA 82
           +K  KP KT+ K    ++ GG+N   +  L DED T + +    +   R KS  N PH  
Sbjct: 303 RKADKPPKTENKK--SNNNGGNNNGGQMLL-DEDITIVPRTLSKRSIRRFKSQSNPPHFM 359

Query: 81  DTRSDSSGSGNREYWIKTDADYLVLEL 1
            T  DS+GS  RE WIKTDADYLVLEL
Sbjct: 360 FTGCDSNGS--RECWIKTDADYLVLEL 384


>emb|CAN72196.1| hypothetical protein VITISV_014980 [Vitis vinifera]
          Length = 458

 Score =  155 bits (392), Expect = 5e-36
 Identities = 93/198 (46%), Positives = 123/198 (62%), Gaps = 13/198 (6%)
 Frame = -3

Query: 573 VCPLQEYLFGSRVELPQLTTVAKKENRTSLGELFQKTRVGE-----EMGDNXXXXXXXXX 409
           VCPLQ YLFGS +ELP+ TTVAKKE+RTSLGELFQ+++        E G+          
Sbjct: 248 VCPLQGYLFGSAIELPETTTVAKKEHRTSLGELFQRSKEENSGAKCERGEKRTDKEADKS 307

Query: 408 XXXXXXKILKRMILGSSS-------AAADSIAVETKLNKLLQMFHRKVHPEDSTTPKKCS 250
                 K+LK+ +L +SS          DS + ETKL+K+L MFHRKVHPE ST  +K +
Sbjct: 308 AVHIMKKMLKKKMLHASSRNSTAAGGTVDSASAETKLHKILHMFHRKVHPESSTATEKPN 367

Query: 249 KPNKTDMKNHIPHDGGGSNYSREHTLPDEDSTTIHKISVSKDRV-RHKSHLNTPHVADTR 73
           +P+K ++KN I +DGG +N  R   LPDED     + ++SK+ + R+KS  N P      
Sbjct: 368 RPHKNEIKNGIFYDGGCNNGDR--MLPDEDIMIFPQRTLSKESIRRYKSQSNPPQFTLCG 425

Query: 72  SDSSGSGNREYWIKTDAD 19
           +DS  +GNREYWIKTDAD
Sbjct: 426 NDS--NGNREYWIKTDAD 441


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