BLASTX nr result
ID: Coptis24_contig00030437
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030437 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003538491.1| PREDICTED: alpha-soluble NSF attachment prot... 55 3e-06 gb|ACJ11717.1| alpha-soluble NSF attachment protein [Gossypium h... 55 5e-06 ref|XP_003534662.1| PREDICTED: alpha-soluble NSF attachment prot... 55 8e-06 ref|XP_002266242.1| PREDICTED: alpha-soluble NSF attachment prot... 54 8e-06 emb|CAN72953.1| hypothetical protein VITISV_009781 [Vitis vinifera] 54 8e-06 >ref|XP_003538491.1| PREDICTED: alpha-soluble NSF attachment protein-like [Glycine max] Length = 289 Score = 55.5 bits (132), Expect(2) = 3e-06 Identities = 24/43 (55%), Positives = 33/43 (76%) Frame = +1 Query: 1 REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLL 129 REY+FLA++AAAI E D +F +V ++F+ +TPLD WK LLL Sbjct: 230 REYRFLADIAAAIDEEDVAKFTDVVKEFDSMTPLDSWKTTLLL 272 Score = 20.4 bits (41), Expect(2) = 3e-06 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = +3 Query: 171 LRAREPEEEDLT 206 L+A+E EE+DLT Sbjct: 278 LKAKELEEDDLT 289 >gb|ACJ11717.1| alpha-soluble NSF attachment protein [Gossypium hirsutum] Length = 289 Score = 54.7 bits (130), Expect(2) = 5e-06 Identities = 24/43 (55%), Positives = 33/43 (76%) Frame = +1 Query: 1 REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLL 129 REYK LA++A+AI E D ++F EV ++F+ +TPLD WK LLL Sbjct: 230 REYKLLADIASAIDEEDVSKFTEVVKEFDSMTPLDSWKTTLLL 272 Score = 20.4 bits (41), Expect(2) = 5e-06 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = +3 Query: 171 LRAREPEEEDLT 206 L+A+E EE+DLT Sbjct: 278 LKAKELEEDDLT 289 >ref|XP_003534662.1| PREDICTED: alpha-soluble NSF attachment protein-like [Glycine max] Length = 290 Score = 54.7 bits (130), Expect = 8e-06 Identities = 25/49 (51%), Positives = 34/49 (69%) Frame = +1 Query: 1 REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLLSATFAL 147 REYKFLA+L+A+I E D +F V ++FN +TPL+ WK LLL A+ Sbjct: 231 REYKFLADLSASIDEGDVEKFTRVVKEFNSITPLESWKSTLLLRVKDAM 279 >ref|XP_002266242.1| PREDICTED: alpha-soluble NSF attachment protein [Vitis vinifera] gi|297735583|emb|CBI18077.3| unnamed protein product [Vitis vinifera] Length = 289 Score = 53.5 bits (127), Expect(2) = 8e-06 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +1 Query: 1 REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLLSATFALGEAE 159 REYK LA+LA A+ E D +F +V ++F+ +TPLD WK LLL +L E Sbjct: 230 REYKLLADLAVAVDEEDVAKFTDVVKEFDSMTPLDAWKTTLLLRVKESLKAKE 282 Score = 20.8 bits (42), Expect(2) = 8e-06 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = +3 Query: 168 ALRAREPEEEDLT 206 +L+A+E EE+DLT Sbjct: 277 SLKAKELEEDDLT 289 >emb|CAN72953.1| hypothetical protein VITISV_009781 [Vitis vinifera] Length = 289 Score = 53.5 bits (127), Expect(2) = 8e-06 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +1 Query: 1 REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLLSATFALGEAE 159 REYK LA+LA A+ E D +F +V ++F+ +TPLD WK LLL +L E Sbjct: 230 REYKLLADLAVAVDEEDVAKFTDVVKEFDSMTPLDAWKTTLLLRVKESLKAKE 282 Score = 20.8 bits (42), Expect(2) = 8e-06 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = +3 Query: 168 ALRAREPEEEDLT 206 +L+A+E EE+DLT Sbjct: 277 SLKAKELEEDDLT 289