BLASTX nr result

ID: Coptis24_contig00030437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030437
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538491.1| PREDICTED: alpha-soluble NSF attachment prot...    55   3e-06
gb|ACJ11717.1| alpha-soluble NSF attachment protein [Gossypium h...    55   5e-06
ref|XP_003534662.1| PREDICTED: alpha-soluble NSF attachment prot...    55   8e-06
ref|XP_002266242.1| PREDICTED: alpha-soluble NSF attachment prot...    54   8e-06
emb|CAN72953.1| hypothetical protein VITISV_009781 [Vitis vinifera]    54   8e-06

>ref|XP_003538491.1| PREDICTED: alpha-soluble NSF attachment protein-like [Glycine max]
          Length = 289

 Score = 55.5 bits (132), Expect(2) = 3e-06
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = +1

Query: 1   REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLL 129
           REY+FLA++AAAI E D  +F +V ++F+ +TPLD WK  LLL
Sbjct: 230 REYRFLADIAAAIDEEDVAKFTDVVKEFDSMTPLDSWKTTLLL 272



 Score = 20.4 bits (41), Expect(2) = 3e-06
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 171 LRAREPEEEDLT 206
           L+A+E EE+DLT
Sbjct: 278 LKAKELEEDDLT 289


>gb|ACJ11717.1| alpha-soluble NSF attachment protein [Gossypium hirsutum]
          Length = 289

 Score = 54.7 bits (130), Expect(2) = 5e-06
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = +1

Query: 1   REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLL 129
           REYK LA++A+AI E D ++F EV ++F+ +TPLD WK  LLL
Sbjct: 230 REYKLLADIASAIDEEDVSKFTEVVKEFDSMTPLDSWKTTLLL 272



 Score = 20.4 bits (41), Expect(2) = 5e-06
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 171 LRAREPEEEDLT 206
           L+A+E EE+DLT
Sbjct: 278 LKAKELEEDDLT 289


>ref|XP_003534662.1| PREDICTED: alpha-soluble NSF attachment protein-like [Glycine max]
          Length = 290

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = +1

Query: 1   REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLLSATFAL 147
           REYKFLA+L+A+I E D  +F  V ++FN +TPL+ WK  LLL    A+
Sbjct: 231 REYKFLADLSASIDEGDVEKFTRVVKEFNSITPLESWKSTLLLRVKDAM 279


>ref|XP_002266242.1| PREDICTED: alpha-soluble NSF attachment protein [Vitis vinifera]
           gi|297735583|emb|CBI18077.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score = 53.5 bits (127), Expect(2) = 8e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%)
 Frame = +1

Query: 1   REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLLSATFALGEAE 159
           REYK LA+LA A+ E D  +F +V ++F+ +TPLD WK  LLL    +L   E
Sbjct: 230 REYKLLADLAVAVDEEDVAKFTDVVKEFDSMTPLDAWKTTLLLRVKESLKAKE 282



 Score = 20.8 bits (42), Expect(2) = 8e-06
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +3

Query: 168 ALRAREPEEEDLT 206
           +L+A+E EE+DLT
Sbjct: 277 SLKAKELEEDDLT 289


>emb|CAN72953.1| hypothetical protein VITISV_009781 [Vitis vinifera]
          Length = 289

 Score = 53.5 bits (127), Expect(2) = 8e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%)
 Frame = +1

Query: 1   REYKFLAELAAAIYEVDATRFNEVAQQFNKVTPLDGWKILLLLSATFALGEAE 159
           REYK LA+LA A+ E D  +F +V ++F+ +TPLD WK  LLL    +L   E
Sbjct: 230 REYKLLADLAVAVDEEDVAKFTDVVKEFDSMTPLDAWKTTLLLRVKESLKAKE 282



 Score = 20.8 bits (42), Expect(2) = 8e-06
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +3

Query: 168 ALRAREPEEEDLT 206
           +L+A+E EE+DLT
Sbjct: 277 SLKAKELEEDDLT 289


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