BLASTX nr result

ID: Coptis24_contig00030433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030433
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509578.1| protein with unknown function [Ricinus commu...   367   2e-99
ref|XP_002329864.1| predicted protein [Populus trichocarpa] gi|2...   360   1e-97
emb|CAN63693.1| hypothetical protein VITISV_026816 [Vitis vinifera]   360   2e-97
ref|XP_002266769.1| PREDICTED: UPF0551 protein C8orf38 homolog, ...   357   2e-96
ref|XP_004147937.1| PREDICTED: NADH dehydrogenase (ubiquinone) c...   353   2e-95

>ref|XP_002509578.1| protein with unknown function [Ricinus communis]
           gi|223549477|gb|EEF50965.1| protein with unknown
           function [Ricinus communis]
          Length = 351

 Score =  367 bits (942), Expect = 2e-99
 Identities = 186/239 (77%), Positives = 209/239 (87%)
 Frame = -1

Query: 747 LMNGASTSSSIRAALSYCVQQVRSYDYHHYLCLLQLPHDMRKAAFALRAFNVETARAMDV 568
           LM G S  SS+RAA S+CV+QVRSYDYHHYLCLL+LP  MRKAAFALRAFNVETARAMDV
Sbjct: 50  LMKGVS--SSLRAAFSHCVEQVRSYDYHHYLCLLELPPHMRKAAFALRAFNVETARAMDV 107

Query: 567 ASDPRIGLMRLLWWQEAIDKIYSRKVVEHPTAQALSSVVFDHKINKSWLKRSVEARINDA 388
           ASDPRIGLMRLLWWQE IDKIY+ K++EHPTAQALSS + ++KI K WLKRSVEARINDA
Sbjct: 108 ASDPRIGLMRLLWWQETIDKIYANKLIEHPTAQALSSAISEYKITKGWLKRSVEARINDA 167

Query: 387 RREGDDIPEKIEELEQYAEDTMSTILYSTLQSGGIKSTNADHAASHIGKASGXXXXLRSL 208
           RRE  DIPE IEELE+YAEDT+STILY TLQ+GGI+ST ADHAASH+GKASG    LRSL
Sbjct: 168 RREVTDIPETIEELEKYAEDTVSTILYMTLQAGGIRSTAADHAASHVGKASGLLLLLRSL 227

Query: 207 PYHASCNRLISYIPAELASKHGLLVEQDGRRQIRMDSREGLTDCVFEMASVANNHLQKA 31
           PYHAS NR  SYIP+E+A+KHGLLV++ GR +IR+DSREGL D VFE+ASVAN HLQKA
Sbjct: 228 PYHASRNRHFSYIPSEVAAKHGLLVKERGRPEIRIDSREGLCDTVFEIASVANVHLQKA 286


>ref|XP_002329864.1| predicted protein [Populus trichocarpa] gi|222871101|gb|EEF08232.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  360 bits (925), Expect = 1e-97
 Identities = 182/238 (76%), Positives = 207/238 (86%)
 Frame = -1

Query: 744 MNGASTSSSIRAALSYCVQQVRSYDYHHYLCLLQLPHDMRKAAFALRAFNVETARAMDVA 565
           MNGAS  SS+R A SYCVQQVR+YDYHHYLCLL+LP ++RKAAFALRAFNVETARAMDVA
Sbjct: 1   MNGAS--SSLRTAFSYCVQQVRNYDYHHYLCLLELPPNIRKAAFALRAFNVETARAMDVA 58

Query: 564 SDPRIGLMRLLWWQEAIDKIYSRKVVEHPTAQALSSVVFDHKINKSWLKRSVEARINDAR 385
           SDPRIGLMRLLWWQEAIDKIY+ KV+EHP AQALSSV+ +++I+K WLKR VEARINDAR
Sbjct: 59  SDPRIGLMRLLWWQEAIDKIYANKVIEHPAAQALSSVISENRISKGWLKRPVEARINDAR 118

Query: 384 REGDDIPEKIEELEQYAEDTMSTILYSTLQSGGIKSTNADHAASHIGKASGXXXXLRSLP 205
           RE  DIPE IEELE+YAEDT+ST+LY TLQ+GGI+ST ADHAASH GKASG    LRSLP
Sbjct: 119 REVTDIPETIEELEKYAEDTISTLLYMTLQAGGIRSTAADHAASHAGKASGLLLLLRSLP 178

Query: 204 YHASCNRLISYIPAELASKHGLLVEQDGRRQIRMDSREGLTDCVFEMASVANNHLQKA 31
           YHAS NR   YIP E+A+KHGLLV++ GR +IR+DSRE L + VF+MASVAN HLQKA
Sbjct: 179 YHASRNRHFCYIPTEVAAKHGLLVKEGGRFEIRLDSRESLCNAVFDMASVANVHLQKA 236


>emb|CAN63693.1| hypothetical protein VITISV_026816 [Vitis vinifera]
          Length = 303

 Score =  360 bits (924), Expect = 2e-97
 Identities = 177/238 (74%), Positives = 206/238 (86%)
 Frame = -1

Query: 744 MNGASTSSSIRAALSYCVQQVRSYDYHHYLCLLQLPHDMRKAAFALRAFNVETARAMDVA 565
           M GAS SS+I+AA SYCVQQVR+YDYHHYLC ++LP +MRKAAFA+RAFNVETARAMD+A
Sbjct: 1   MKGASASSTIQAAFSYCVQQVRNYDYHHYLCNIELPPNMRKAAFAIRAFNVETARAMDIA 60

Query: 564 SDPRIGLMRLLWWQEAIDKIYSRKVVEHPTAQALSSVVFDHKINKSWLKRSVEARINDAR 385
           SDPR+GLMRLLWWQEAIDKI++ K +EHPTAQAL+SVV +HKI+K W+KRSVEARINDAR
Sbjct: 61  SDPRVGLMRLLWWQEAIDKIFANKTIEHPTAQALASVVSEHKISKGWMKRSVEARINDAR 120

Query: 384 REGDDIPEKIEELEQYAEDTMSTILYSTLQSGGIKSTNADHAASHIGKASGXXXXLRSLP 205
           RE  D+PE IEELE+YAEDT+ST+LY+TLQ+GGI+ST ADHAASHIGKASG    LRSLP
Sbjct: 121 REVTDMPETIEELERYAEDTVSTLLYTTLQAGGIRSTAADHAASHIGKASGLLLLLRSLP 180

Query: 204 YHASCNRLISYIPAELASKHGLLVEQDGRRQIRMDSREGLTDCVFEMASVANNHLQKA 31
           YHA+ NR   YIP +LA+ H LL  Q GR +IRMDS EGL D VF+MASVAN HL+KA
Sbjct: 181 YHANRNRQFPYIPKDLAANHNLLDTQGGRSEIRMDSPEGLCDVVFDMASVANAHLEKA 238


>ref|XP_002266769.1| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial-like
           [Vitis vinifera]
          Length = 303

 Score =  357 bits (916), Expect = 2e-96
 Identities = 176/238 (73%), Positives = 205/238 (86%)
 Frame = -1

Query: 744 MNGASTSSSIRAALSYCVQQVRSYDYHHYLCLLQLPHDMRKAAFALRAFNVETARAMDVA 565
           M GAS SS+I+AA SYCVQQVR+YDYHHYLC ++LP +M KAAFA+RAFNVETARAMD+A
Sbjct: 1   MKGASASSTIQAAFSYCVQQVRNYDYHHYLCNIELPPNMWKAAFAIRAFNVETARAMDIA 60

Query: 564 SDPRIGLMRLLWWQEAIDKIYSRKVVEHPTAQALSSVVFDHKINKSWLKRSVEARINDAR 385
           SDPR+GLMRLLWWQEAIDKI++ K +EHPTAQAL+SVV +HKI+K W+KRSVEARINDAR
Sbjct: 61  SDPRVGLMRLLWWQEAIDKIFANKTIEHPTAQALASVVSEHKISKGWMKRSVEARINDAR 120

Query: 384 REGDDIPEKIEELEQYAEDTMSTILYSTLQSGGIKSTNADHAASHIGKASGXXXXLRSLP 205
           RE  D+PE IEELE+YAEDT+ST+LY+TLQ+GGI+ST ADHAASHIGKASG    LRSLP
Sbjct: 121 REVTDMPETIEELERYAEDTVSTLLYTTLQAGGIRSTAADHAASHIGKASGLLLLLRSLP 180

Query: 204 YHASCNRLISYIPAELASKHGLLVEQDGRRQIRMDSREGLTDCVFEMASVANNHLQKA 31
           YHA+ NR   YIP +LA+ H LL  Q GR +IRMDS EGL D VF+MASVAN HL+KA
Sbjct: 181 YHANRNRQFPYIPKDLAANHNLLDTQGGRSEIRMDSPEGLCDVVFDMASVANAHLEKA 238


>ref|XP_004147937.1| PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly
           factor 6-like [Cucumis sativus]
           gi|449494336|ref|XP_004159517.1| PREDICTED: NADH
           dehydrogenase (ubiquinone) complex I, assembly factor
           6-like [Cucumis sativus]
          Length = 303

 Score =  353 bits (907), Expect = 2e-95
 Identities = 177/238 (74%), Positives = 202/238 (84%)
 Frame = -1

Query: 744 MNGASTSSSIRAALSYCVQQVRSYDYHHYLCLLQLPHDMRKAAFALRAFNVETARAMDVA 565
           MNG   SSS+RAA S+CVQQVRSYDYHHYLCLL+LP  MRKAAFALRAFNVET+RAMDVA
Sbjct: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60

Query: 564 SDPRIGLMRLLWWQEAIDKIYSRKVVEHPTAQALSSVVFDHKINKSWLKRSVEARINDAR 385
           +DPRIGLMRL+WWQEAIDKIY+ K +EHP AQALSSV+ ++KI+K WLKRSVEARINDAR
Sbjct: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 384 REGDDIPEKIEELEQYAEDTMSTILYSTLQSGGIKSTNADHAASHIGKASGXXXXLRSLP 205
           RE  DIP  I+ELE+YAEDT ST+LY TLQ+GGI+ST ADHAASHIGKASG    L+SLP
Sbjct: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180

Query: 204 YHASCNRLISYIPAELASKHGLLVEQDGRRQIRMDSREGLTDCVFEMASVANNHLQKA 31
           YHA+ NR  SYIP ++A  HGLL ++  R +IR+DSRE L D VFEMASVAN HLQKA
Sbjct: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKA 238


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