BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030428
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                57   1e-08

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 57.0 bits (136), Expect(2) = 1e-08
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -1

Query: 812  GMDPTNRKSTTGICVFLGDLFISWKTKKQSVVS 714
            G DPT+RKS TG C+FLGD  ISWK+KKQS+VS
Sbjct: 1234 GSDPTDRKSVTGFCIFLGDSLISWKSKKQSIVS 1266



 Score = 28.9 bits (63), Expect(2) = 1e-08
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 873  QSVFLPTTSTLTLRAYSDVD 814
            QS+ L +TS+L LRAYSD D
Sbjct: 1213 QSLLLSSTSSLELRAYSDAD 1232