BLASTX nr result

ID: Coptis24_contig00030425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030425
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310385.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-53
ref|XP_002331615.1| predicted protein [Populus trichocarpa] gi|2...   205   5e-53
ref|XP_002338901.1| predicted protein [Populus trichocarpa] gi|2...   204   9e-53
ref|XP_002331630.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-52
ref|XP_002331621.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-52

>ref|XP_002310385.1| predicted protein [Populus trichocarpa] gi|222853288|gb|EEE90835.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  205 bits (522), Expect(2) = 2e-53
 Identities = 97/159 (61%), Positives = 121/159 (76%)
 Frame = -1

Query: 478 YEKMGSAKYWMLFDKVEGVNITGGFLDGQGSSLWSCKGVAGQDCPVGATSLTFFGSKDVT 299
           Y  +G  K W++F+ V GV I+GG LDGQG+ LWSCK  +G+DCP GATSL F  S ++ 
Sbjct: 105 YGVLGRTKNWLIFEHVNGVTISGGTLDGQGAGLWSCKN-SGKDCPSGATSLEFSNSNNIA 163

Query: 298 IQNLTSINAKLYHIVILSSQNVVLQGVRIYAPEESPNTDGVHVEKSLNVRILNSGIKTGD 119
           I  L S+N++++HIVI + QNV +QGVR+ A  +SPNTDG+HV+ S  V ILNS I TGD
Sbjct: 164 ITGLASLNSQMFHIVINACQNVKVQGVRVSAAGDSPNTDGIHVQSSTGVTILNSRIGTGD 223

Query: 118 DCVSIGPGTKDLWIQRVACGPGHGISIGSLGKEVNEEGV 2
           DCVSIGPGT +LWI+ VACGPGHGISIGSLGK+  E GV
Sbjct: 224 DCVSIGPGTSNLWIENVACGPGHGISIGSLGKDSQEAGV 262



 Score = 28.9 bits (63), Expect(2) = 2e-53
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 540 EGPCTNSGITLRIDGILV 487
           +GPC N+ I +RIDG LV
Sbjct: 83  QGPCKNNAILIRIDGTLV 100


>ref|XP_002331615.1| predicted protein [Populus trichocarpa] gi|222874011|gb|EEF11142.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  205 bits (522), Expect(2) = 5e-53
 Identities = 98/159 (61%), Positives = 120/159 (75%)
 Frame = -1

Query: 478 YEKMGSAKYWMLFDKVEGVNITGGFLDGQGSSLWSCKGVAGQDCPVGATSLTFFGSKDVT 299
           Y+ +G+AK W++F+ V GV ++GG LDGQG+ LWSCK  +G+ CP GATSL F  S ++ 
Sbjct: 104 YKVIGNAKNWLMFEHVNGVTVSGGTLDGQGAGLWSCKN-SGKGCPRGATSLDFSNSNNIA 162

Query: 298 IQNLTSINAKLYHIVILSSQNVVLQGVRIYAPEESPNTDGVHVEKSLNVRILNSGIKTGD 119
           I  L S+N++L+HIVI   QNV +QGVR+ A   SPNTDG+HV+ S  V ILNS I TGD
Sbjct: 163 ITGLASLNSQLFHIVIHGCQNVKVQGVRVSAAGNSPNTDGIHVQSSTGVTILNSRIGTGD 222

Query: 118 DCVSIGPGTKDLWIQRVACGPGHGISIGSLGKEVNEEGV 2
           DCVSIGPGT  LWI+ VACGPGHGISIGSLGKE  E GV
Sbjct: 223 DCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGV 261



 Score = 27.7 bits (60), Expect(2) = 5e-53
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 540 EGPCTNSGITLRIDGILV 487
           +GPC N  I +RIDG LV
Sbjct: 82  QGPCKNRAILVRIDGTLV 99


>ref|XP_002338901.1| predicted protein [Populus trichocarpa] gi|222873867|gb|EEF10998.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  204 bits (519), Expect(2) = 9e-53
 Identities = 97/159 (61%), Positives = 120/159 (75%)
 Frame = -1

Query: 478 YEKMGSAKYWMLFDKVEGVNITGGFLDGQGSSLWSCKGVAGQDCPVGATSLTFFGSKDVT 299
           Y+ +G+AK W++F+ V GV ++GG LDGQG+ LWSCK  +G+ CP GATSL F  S ++ 
Sbjct: 97  YKVIGNAKNWLIFEHVNGVTVSGGTLDGQGAGLWSCKN-SGKGCPRGATSLEFSNSNNIA 155

Query: 298 IQNLTSINAKLYHIVILSSQNVVLQGVRIYAPEESPNTDGVHVEKSLNVRILNSGIKTGD 119
           I  L S+N++L+HIVI   QNV +QGV++ A   SPNTDG+HV+ S  V ILNS I TGD
Sbjct: 156 ITGLASLNSQLFHIVINGCQNVKVQGVKVSAAGNSPNTDGIHVQSSTGVTILNSRIGTGD 215

Query: 118 DCVSIGPGTKDLWIQRVACGPGHGISIGSLGKEVNEEGV 2
           DCVSIGPGT  LWI+ VACGPGHGISIGSLGKE  E GV
Sbjct: 216 DCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGV 254



 Score = 28.1 bits (61), Expect(2) = 9e-53
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 540 EGPCTNSGITLRIDGILV 487
           +GPC N  I +RIDG LV
Sbjct: 75  QGPCNNRAILVRIDGTLV 92


>ref|XP_002331630.1| predicted protein [Populus trichocarpa] gi|222874026|gb|EEF11157.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  204 bits (519), Expect(2) = 1e-52
 Identities = 97/159 (61%), Positives = 120/159 (75%)
 Frame = -1

Query: 478 YEKMGSAKYWMLFDKVEGVNITGGFLDGQGSSLWSCKGVAGQDCPVGATSLTFFGSKDVT 299
           Y+ +G+AK W++F+ V GV ++GG LDGQG+ LWSCK  +G+ CP GATSL F  S ++ 
Sbjct: 104 YKVIGNAKNWLMFEHVNGVTVSGGTLDGQGAGLWSCKN-SGKGCPRGATSLEFSNSNNIA 162

Query: 298 IQNLTSINAKLYHIVILSSQNVVLQGVRIYAPEESPNTDGVHVEKSLNVRILNSGIKTGD 119
           I  L S+N++L+HIVI   QNV +QGV++ A   SPNTDG+HV+ S  V ILNS I TGD
Sbjct: 163 ITGLASLNSQLFHIVINGCQNVKVQGVKVSAAGSSPNTDGIHVQSSTGVTILNSRIGTGD 222

Query: 118 DCVSIGPGTKDLWIQRVACGPGHGISIGSLGKEVNEEGV 2
           DCVSIGPGT  LWI+ VACGPGHGISIGSLGKE  E GV
Sbjct: 223 DCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGV 261



 Score = 27.7 bits (60), Expect(2) = 1e-52
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 540 EGPCTNSGITLRIDGILV 487
           +GPC N  I +RIDG LV
Sbjct: 82  QGPCKNRAILVRIDGTLV 99


>ref|XP_002331621.1| predicted protein [Populus trichocarpa] gi|222874017|gb|EEF11148.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  204 bits (519), Expect(2) = 1e-52
 Identities = 97/159 (61%), Positives = 120/159 (75%)
 Frame = -1

Query: 478 YEKMGSAKYWMLFDKVEGVNITGGFLDGQGSSLWSCKGVAGQDCPVGATSLTFFGSKDVT 299
           Y+ +G+AK W++F+ V GV ++GG LDGQG+ LWSCK  +G+ CP GATSL F  S ++ 
Sbjct: 104 YKVIGNAKNWLMFEHVNGVTVSGGTLDGQGAGLWSCKN-SGKGCPRGATSLEFSNSNNIA 162

Query: 298 IQNLTSINAKLYHIVILSSQNVVLQGVRIYAPEESPNTDGVHVEKSLNVRILNSGIKTGD 119
           I  L S+N++L+HIVI   QNV +QGV++ A   SPNTDG+HV+ S  V ILNS I TGD
Sbjct: 163 ITGLASLNSQLFHIVIHGCQNVKVQGVKVSAAGNSPNTDGIHVQSSTGVTILNSRIGTGD 222

Query: 118 DCVSIGPGTKDLWIQRVACGPGHGISIGSLGKEVNEEGV 2
           DCVSIGPGT  LWI+ VACGPGHGISIGSLGKE  E GV
Sbjct: 223 DCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGV 261



 Score = 27.7 bits (60), Expect(2) = 1e-52
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 540 EGPCTNSGITLRIDGILV 487
           +GPC N  I +RIDG LV
Sbjct: 82  QGPCKNRAILVRIDGTLV 99


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