BLASTX nr result

ID: Coptis24_contig00030423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030423
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308001.1| predicted protein [Populus trichocarpa] gi|2...   207   6e-52
ref|XP_002530095.1| hypothetical protein RCOM_0255070 [Ricinus c...   203   1e-50
gb|ABD33312.1| GCN5-related N-acetyltransferase; BRCT [Medicago ...   200   1e-49
ref|XP_003625077.1| Mediator of DNA damage checkpoint protein [M...   200   1e-49
emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]   199   2e-49

>ref|XP_002308001.1| predicted protein [Populus trichocarpa] gi|222853977|gb|EEE91524.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  207 bits (528), Expect = 6e-52
 Identities = 103/157 (65%), Positives = 126/157 (80%)
 Frame = +1

Query: 67  QIIGNLGGAITSDGKVSTHVITGKARMTRNFCVALCSGAWVVSTNWLKESSRERIFLDEL 246
           ++I  LGGA+T DG VSTHV+TGK R T NFC AL SGAW+VS+ WLKES R+  F+DEL
Sbjct: 350 KVIETLGGAVTPDGSVSTHVVTGKVRTTLNFCTALSSGAWIVSSKWLKESFRKGRFVDEL 409

Query: 247 PFILQDEDYVSKYRLELKDAVLRAKACPRALLKGYDIRLAKHVQPSVNTLSDIVKAAGGN 426
           P+IL DE+YV K++ ELKDAVLRA+A P+ALLKGY++ +AKHVQP   TLS IV++AGGN
Sbjct: 410 PYILYDEEYVLKHKAELKDAVLRARARPQALLKGYNVCIAKHVQPPFQTLSAIVESAGGN 469

Query: 427 VIRTLGKMREPLRTIFVACEEDMEEAMLAAKKGIWTF 537
           VI  L K  E  +TIFVACEED+EEA+ AAKKG+ TF
Sbjct: 470 VISGLDKENEASKTIFVACEEDIEEALSAAKKGMRTF 506


>ref|XP_002530095.1| hypothetical protein RCOM_0255070 [Ricinus communis]
           gi|223530406|gb|EEF32294.1| hypothetical protein
           RCOM_0255070 [Ricinus communis]
          Length = 572

 Score =  203 bits (517), Expect = 1e-50
 Identities = 96/157 (61%), Positives = 123/157 (78%)
 Frame = +1

Query: 67  QIIGNLGGAITSDGKVSTHVITGKARMTRNFCVALCSGAWVVSTNWLKESSRERIFLDEL 246
           ++I +LGG +TSDG +STHV+TGK R T NFC ALCSGAW+VS++WLKES +   F+DE 
Sbjct: 391 KVIESLGGTVTSDGSISTHVVTGKIRKTLNFCTALCSGAWIVSSSWLKESFQNGRFVDEW 450

Query: 247 PFILQDEDYVSKYRLELKDAVLRAKACPRALLKGYDIRLAKHVQPSVNTLSDIVKAAGGN 426
           P +L DE+Y+ KYR  LKDA+LRAKA P+ALL+GYDI ++ H+QP V TLS IVK+AGGN
Sbjct: 451 PHVLHDEEYMLKYRTGLKDAILRAKARPKALLRGYDICISAHIQPPVKTLSAIVKSAGGN 510

Query: 427 VIRTLGKMREPLRTIFVACEEDMEEAMLAAKKGIWTF 537
           ++  L K+ E    IFV CEE+MEEA+ A+KKGI TF
Sbjct: 511 IVSGLNKISEASNAIFVGCEENMEEALSASKKGIQTF 547


>gb|ABD33312.1| GCN5-related N-acetyltransferase; BRCT [Medicago truncatula]
          Length = 650

 Score =  200 bits (509), Expect = 1e-49
 Identities = 99/157 (63%), Positives = 122/157 (77%)
 Frame = +1

Query: 67  QIIGNLGGAITSDGKVSTHVITGKARMTRNFCVALCSGAWVVSTNWLKESSRERIFLDEL 246
           ++I +LGG I SDG  +THV+TG+ R T NFC ALCSGAWVVS++WLKES RE  F+DEL
Sbjct: 466 KVIEDLGGTIASDGSSTTHVVTGQVRKTLNFCTALCSGAWVVSSSWLKESFREGRFVDEL 525

Query: 247 PFILQDEDYVSKYRLELKDAVLRAKACPRALLKGYDIRLAKHVQPSVNTLSDIVKAAGGN 426
           P IL D+DY+ KY+ +L+ AVLRAKACP +L KGY+I +A +VQ    TLS IV++AGGN
Sbjct: 526 PHILNDKDYLLKYKSDLRSAVLRAKACPHSLFKGYNICIAANVQTPAKTLSAIVRSAGGN 585

Query: 427 VIRTLGKMREPLRTIFVACEEDMEEAMLAAKKGIWTF 537
           VI  L K+ E   TIFV CEED+EEAM+AAKKGI TF
Sbjct: 586 VISGLKKVNEASTTIFVTCEEDIEEAMMAAKKGIRTF 622


>ref|XP_003625077.1| Mediator of DNA damage checkpoint protein [Medicago truncatula]
           gi|355500092|gb|AES81295.1| Mediator of DNA damage
           checkpoint protein [Medicago truncatula]
          Length = 683

 Score =  200 bits (509), Expect = 1e-49
 Identities = 99/157 (63%), Positives = 122/157 (77%)
 Frame = +1

Query: 67  QIIGNLGGAITSDGKVSTHVITGKARMTRNFCVALCSGAWVVSTNWLKESSRERIFLDEL 246
           ++I +LGG I SDG  +THV+TG+ R T NFC ALCSGAWVVS++WLKES RE  F+DEL
Sbjct: 499 KVIEDLGGTIASDGSSTTHVVTGQVRKTLNFCTALCSGAWVVSSSWLKESFREGRFVDEL 558

Query: 247 PFILQDEDYVSKYRLELKDAVLRAKACPRALLKGYDIRLAKHVQPSVNTLSDIVKAAGGN 426
           P IL D+DY+ KY+ +L+ AVLRAKACP +L KGY+I +A +VQ    TLS IV++AGGN
Sbjct: 559 PHILNDKDYLLKYKSDLRSAVLRAKACPHSLFKGYNICIAANVQTPAKTLSAIVRSAGGN 618

Query: 427 VIRTLGKMREPLRTIFVACEEDMEEAMLAAKKGIWTF 537
           VI  L K+ E   TIFV CEED+EEAM+AAKKGI TF
Sbjct: 619 VISGLKKVNEASTTIFVTCEEDIEEAMMAAKKGIRTF 655


>emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
          Length = 1945

 Score =  199 bits (506), Expect = 2e-49
 Identities = 98/157 (62%), Positives = 119/157 (75%)
 Frame = +1

Query: 67   QIIGNLGGAITSDGKVSTHVITGKARMTRNFCVALCSGAWVVSTNWLKESSRERIFLDEL 246
            +II +LGG++TSDG   THV+TGK R T NFC ALCSGAW++S +WLKES  E  F+DE 
Sbjct: 1764 KIIKDLGGSVTSDGSACTHVVTGKVRKTLNFCTALCSGAWILSPSWLKESFHEGRFVDES 1823

Query: 247  PFILQDEDYVSKYRLELKDAVLRAKACPRALLKGYDIRLAKHVQPSVNTLSDIVKAAGGN 426
             FIL+D +Y+ KYR E+K  +LRAKA PRALLKGY + LA HVQP+V TLS IV+ AGG 
Sbjct: 1824 AFILEDAEYLFKYRAEIKSVILRAKARPRALLKGYSVCLAPHVQPAVETLSTIVRFAGGK 1883

Query: 427  VIRTLGKMREPLRTIFVACEEDMEEAMLAAKKGIWTF 537
            VI  L  + +  +TIFVACE DMEEA+LA KK IWTF
Sbjct: 1884 VIYGLDVVBDASKTIFVACEIDMEEALLAVKKRIWTF 1920


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