BLASTX nr result
ID: Coptis24_contig00030403
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030403 (342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529076.1| histone deacetylase 1, 2 ,3, putative [Ricin... 100 2e-19 ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis... 98 6e-19 ref|XP_003606237.1| Histone deacetylase [Medicago truncatula] gi... 98 8e-19 ref|XP_002300554.1| histone deacetylase [Populus trichocarpa] gi... 97 1e-18 emb|CAH66503.1| H0321H01.12 [Oryza sativa Indica Group] gi|21819... 97 2e-18 >ref|XP_002529076.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis] gi|223531488|gb|EEF33320.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis] Length = 429 Score = 99.8 bits (247), Expect = 2e-19 Identities = 43/46 (93%), Positives = 45/46 (97%) Frame = +1 Query: 205 MRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342 MRSKD+I+YFYDGDVGNVYFGPNHPMKPHRL MTHHLVLSYDLHKK Sbjct: 1 MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKK 46 >ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis vinifera] Length = 458 Score = 98.2 bits (243), Expect = 6e-19 Identities = 42/47 (89%), Positives = 46/47 (97%) Frame = +1 Query: 202 KMRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342 KMRSKD+I+YFYDGDVG+VYFGPNHPMKPHRL MTHHLVLSY+LHKK Sbjct: 28 KMRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKK 74 >ref|XP_003606237.1| Histone deacetylase [Medicago truncatula] gi|355507292|gb|AES88434.1| Histone deacetylase [Medicago truncatula] Length = 430 Score = 97.8 bits (242), Expect = 8e-19 Identities = 42/46 (91%), Positives = 45/46 (97%) Frame = +1 Query: 205 MRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342 MRSKD+I+YFYDGDVG+VYFGPNHPMKPHRL MTHHLVLSYDLHKK Sbjct: 1 MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKK 46 >ref|XP_002300554.1| histone deacetylase [Populus trichocarpa] gi|222847812|gb|EEE85359.1| histone deacetylase [Populus trichocarpa] Length = 429 Score = 97.4 bits (241), Expect = 1e-18 Identities = 42/46 (91%), Positives = 45/46 (97%) Frame = +1 Query: 205 MRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342 MRSKD+IAYFYDGDVG+VYFGPNHPMKPHRL MTHHLVLSY+LHKK Sbjct: 1 MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKK 46 >emb|CAH66503.1| H0321H01.12 [Oryza sativa Indica Group] gi|218194812|gb|EEC77239.1| hypothetical protein OsI_15792 [Oryza sativa Indica Group] gi|222628819|gb|EEE60951.1| hypothetical protein OsJ_14708 [Oryza sativa Japonica Group] Length = 430 Score = 96.7 bits (239), Expect = 2e-18 Identities = 42/46 (91%), Positives = 43/46 (93%) Frame = +1 Query: 205 MRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342 M KD+IAYFYDGDVGNVYFGPNHPMKPHRL MTHHLVLSYDLHKK Sbjct: 1 MLEKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKK 46