BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030403
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529076.1| histone deacetylase 1, 2 ,3, putative [Ricin...   100   2e-19
ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis...    98   6e-19
ref|XP_003606237.1| Histone deacetylase [Medicago truncatula] gi...    98   8e-19
ref|XP_002300554.1| histone deacetylase [Populus trichocarpa] gi...    97   1e-18
emb|CAH66503.1| H0321H01.12 [Oryza sativa Indica Group] gi|21819...    97   2e-18

>ref|XP_002529076.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
           gi|223531488|gb|EEF33320.1| histone deacetylase 1, 2 ,3,
           putative [Ricinus communis]
          Length = 429

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +1

Query: 205 MRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342
           MRSKD+I+YFYDGDVGNVYFGPNHPMKPHRL MTHHLVLSYDLHKK
Sbjct: 1   MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKK 46


>ref|XP_002270071.2| PREDICTED: histone deacetylase 9-like [Vitis vinifera]
          Length = 458

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/47 (89%), Positives = 46/47 (97%)
 Frame = +1

Query: 202 KMRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342
           KMRSKD+I+YFYDGDVG+VYFGPNHPMKPHRL MTHHLVLSY+LHKK
Sbjct: 28  KMRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKK 74


>ref|XP_003606237.1| Histone deacetylase [Medicago truncatula]
           gi|355507292|gb|AES88434.1| Histone deacetylase
           [Medicago truncatula]
          Length = 430

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +1

Query: 205 MRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342
           MRSKD+I+YFYDGDVG+VYFGPNHPMKPHRL MTHHLVLSYDLHKK
Sbjct: 1   MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKK 46


>ref|XP_002300554.1| histone deacetylase [Populus trichocarpa]
           gi|222847812|gb|EEE85359.1| histone deacetylase [Populus
           trichocarpa]
          Length = 429

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +1

Query: 205 MRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342
           MRSKD+IAYFYDGDVG+VYFGPNHPMKPHRL MTHHLVLSY+LHKK
Sbjct: 1   MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKK 46


>emb|CAH66503.1| H0321H01.12 [Oryza sativa Indica Group] gi|218194812|gb|EEC77239.1|
           hypothetical protein OsI_15792 [Oryza sativa Indica
           Group] gi|222628819|gb|EEE60951.1| hypothetical protein
           OsJ_14708 [Oryza sativa Japonica Group]
          Length = 430

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = +1

Query: 205 MRSKDKIAYFYDGDVGNVYFGPNHPMKPHRLSMTHHLVLSYDLHKK 342
           M  KD+IAYFYDGDVGNVYFGPNHPMKPHRL MTHHLVLSYDLHKK
Sbjct: 1   MLEKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKK 46