BLASTX nr result

ID: Coptis24_contig00030394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030394
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329553.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_003631456.1| PREDICTED: uncharacterized protein LOC100853...   151   5e-35
emb|CBI23385.3| unnamed protein product [Vitis vinifera]              151   5e-35
ref|XP_002275217.1| PREDICTED: uncharacterized protein LOC100256...   147   7e-34
ref|XP_002524367.1| conserved hypothetical protein [Ricinus comm...   146   2e-33

>ref|XP_002329553.1| predicted protein [Populus trichocarpa] gi|222870262|gb|EEF07393.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/105 (73%), Positives = 91/105 (86%)
 Frame = +2

Query: 35  AFMLLLGVCIIVGMLETAVVDALLNENQCKEERRIGINACKPVIYGKLPTAECCERVRVS 214
           +F+LL  V +++GM E    DA L+  QCKEERR+G+NACKPVIYGKLP+  CCERVRVS
Sbjct: 8   SFILL--VVVVLGMWEVNKADAALSAAQCKEERRLGLNACKPVIYGKLPSPACCERVRVS 65

Query: 215 HVECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 349
           HVECVCPVITPKLAAL+D++RAI+LI+GCGR VPRHFKCGSITTP
Sbjct: 66  HVECVCPVITPKLAALIDLDRAIRLIEGCGRRVPRHFKCGSITTP 110


>ref|XP_003631456.1| PREDICTED: uncharacterized protein LOC100853134 [Vitis vinifera]
          Length = 111

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/109 (64%), Positives = 87/109 (79%)
 Frame = +2

Query: 23  GISVAFMLLLGVCIIVGMLETAVVDALLNENQCKEERRIGINACKPVIYGKLPTAECCER 202
           G S   M++L V +++GM E     A  +  +CKEERR+ INACKPV+YGK P+  CCER
Sbjct: 4   GKSWGVMVVL-VVLLLGMWEVKTGSAAPSAAECKEERRLAINACKPVVYGKDPSPACCER 62

Query: 203 VRVSHVECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 349
            RV+H+ECVCPVITPKLAAL+DVNRA++LI+GCGR VPRH+KCGSITTP
Sbjct: 63  ARVTHIECVCPVITPKLAALIDVNRAVRLIEGCGRKVPRHYKCGSITTP 111


>emb|CBI23385.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/111 (63%), Positives = 89/111 (80%)
 Frame = +2

Query: 17  MKGISVAFMLLLGVCIIVGMLETAVVDALLNENQCKEERRIGINACKPVIYGKLPTAECC 196
           MKG +   M+++ V  +VGM E  +  A+   + CKEERR+ INACKP++YGK PT  CC
Sbjct: 1   MKGKTWGVMVVM-VVAVVGMWEVKMCGAVSGAD-CKEERRVAINACKPILYGKDPTPACC 58

Query: 197 ERVRVSHVECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 349
           ER+RV+H+ECVCPVITPKLAALVDVNR ++LI+GCGR VPRH+KCGSITTP
Sbjct: 59  ERIRVTHIECVCPVITPKLAALVDVNRMVRLIEGCGRNVPRHYKCGSITTP 109


>ref|XP_002275217.1| PREDICTED: uncharacterized protein LOC100256037 [Vitis vinifera]
          Length = 112

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/109 (60%), Positives = 84/109 (77%)
 Frame = +2

Query: 23  GISVAFMLLLGVCIIVGMLETAVVDALLNENQCKEERRIGINACKPVIYGKLPTAECCER 202
           G S   M++L V ++VGM E     A  +  +CKEE R+ I ACKPV+YG  P+  CCER
Sbjct: 4   GKSCGVMVVLVVVLVVGMWEVKTSSAAPSAAECKEETRLAIKACKPVVYGMDPSPACCER 63

Query: 203 VRVSHVECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 349
            RV+HVECVCP+ITPKLAAL+DVN+A+++I+GCGR VPRH+KCGSITTP
Sbjct: 64  ARVTHVECVCPLITPKLAALIDVNKAVRVIEGCGRKVPRHYKCGSITTP 112


>ref|XP_002524367.1| conserved hypothetical protein [Ricinus communis]
           gi|223536328|gb|EEF37978.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 123

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/104 (62%), Positives = 85/104 (81%)
 Frame = +2

Query: 38  FMLLLGVCIIVGMLETAVVDALLNENQCKEERRIGINACKPVIYGKLPTAECCERVRVSH 217
           F+LL+ V  IV   E    +A  +  QCKEERR+G+NACKPV+YG+ P+ +CC+R+RV+H
Sbjct: 11  FVLLVAVLSIV---EVKTANAAPSAAQCKEERRLGLNACKPVVYGRPPSPQCCQRIRVTH 67

Query: 218 VECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 349
           +ECVCPV+TPKLAAL+DVNRAI++I+GCGR VPRHFKCGS  +P
Sbjct: 68  IECVCPVVTPKLAALIDVNRAIRVIEGCGRRVPRHFKCGSKLSP 111


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