BLASTX nr result

ID: Coptis24_contig00030392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030392
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002536610.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|XP_002539035.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|YP_002608349.1| orf185 [Vitis vinifera] gi|209954145|emb|CAQ...   129   2e-28
ref|YP_005090367.1| orf186 (mitochondrion) [Phoenix dactylifera]...   128   5e-28
ref|XP_002530828.1| conserved hypothetical protein [Ricinus comm...   120   9e-26

>ref|XP_002536610.1| conserved hypothetical protein [Ricinus communis]
           gi|223519108|gb|EEF25773.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/67 (95%), Positives = 66/67 (98%)
 Frame = -1

Query: 312 AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPR 133
           AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERN GLHSVTPR
Sbjct: 118 AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNGGLHSVTPR 177

Query: 132 SPSKRSK 112
           SPS+RS+
Sbjct: 178 SPSERSE 184


>ref|XP_002539035.1| conserved hypothetical protein [Ricinus communis]
           gi|223509127|gb|EEF23347.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/67 (95%), Positives = 66/67 (98%)
 Frame = -1

Query: 312 AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPR 133
           AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERN GLHSVTPR
Sbjct: 58  AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNGGLHSVTPR 117

Query: 132 SPSKRSK 112
           SPS+RS+
Sbjct: 118 SPSERSE 124


>ref|YP_002608349.1| orf185 [Vitis vinifera] gi|209954145|emb|CAQ77575.1| orf185 [Vitis
           vinifera] gi|239764756|gb|ACS15226.1| ORF185 [Vitis
           vinifera]
          Length = 184

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/67 (95%), Positives = 66/67 (98%)
 Frame = -1

Query: 312 AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPR 133
           AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERN GLHSVTPR
Sbjct: 118 AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNGGLHSVTPR 177

Query: 132 SPSKRSK 112
           SPS+RS+
Sbjct: 178 SPSERSE 184


>ref|YP_005090367.1| orf186 (mitochondrion) [Phoenix dactylifera]
           gi|343478422|gb|AEM43910.1| orf186 (mitochondrion)
           [Phoenix dactylifera]
          Length = 185

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/67 (94%), Positives = 65/67 (97%)
 Frame = -1

Query: 312 AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPR 133
           AARGCSCRYVSLSGSLAPPVISFYDMLLSSPY ICHLVISASLRVSTSERN GLHSVTPR
Sbjct: 119 AARGCSCRYVSLSGSLAPPVISFYDMLLSSPYQICHLVISASLRVSTSERNGGLHSVTPR 178

Query: 132 SPSKRSK 112
           SPS+RS+
Sbjct: 179 SPSERSE 185


>ref|XP_002530828.1| conserved hypothetical protein [Ricinus communis]
           gi|223529592|gb|EEF31541.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/66 (90%), Positives = 63/66 (95%)
 Frame = -1

Query: 309 ARGCSCRYVSLSGSLAPPVISFYDMLLSSPYSICHLVISASLRVSTSERNRGLHSVTPRS 130
           ARGCSCRYVSLSGSLAPPVISFYDMLLS PYSICHLVISASLRVSTSERN GLHS+T RS
Sbjct: 164 ARGCSCRYVSLSGSLAPPVISFYDMLLSLPYSICHLVISASLRVSTSERNGGLHSLTLRS 223

Query: 129 PSKRSK 112
           PS+RS+
Sbjct: 224 PSERSE 229


Top