BLASTX nr result
ID: Coptis24_contig00030379
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030379 (472 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003621771.1| F-box family protein [Medicago truncatula] g... 79 5e-13 gb|AFK44336.1| unknown [Lotus japonicus] 77 2e-12 ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23... 74 9e-12 ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm... 74 1e-11 ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 >ref|XP_003621771.1| F-box family protein [Medicago truncatula] gi|355496786|gb|AES77989.1| F-box family protein [Medicago truncatula] Length = 524 Score = 78.6 bits (192), Expect = 5e-13 Identities = 43/131 (32%), Positives = 68/131 (51%) Frame = +2 Query: 80 LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGSHDVSILATTVNH 259 LP E++ EIL+RLP +SL++ +CVCKSW T+ DP F KMH R+ + + S+++ Sbjct: 94 LPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSARNPNFSVVS----- 148 Query: 260 FYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVESYYYEDLE 439 +E DD+++ + HI KDP+ + + E Sbjct: 149 ----YETPSFDDDDHRFVPFPAGSLLDNPHITFP------------KDPYYLLHDKDCRE 192 Query: 440 IVGSCNGIVCL 472 ++GSCNG+VCL Sbjct: 193 VIGSCNGLVCL 203 >gb|AFK44336.1| unknown [Lotus japonicus] Length = 193 Score = 76.6 bits (187), Expect = 2e-12 Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 12/162 (7%) Frame = +2 Query: 20 VIVRPSISMKKIELVQQMAN--------LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLT 175 +++ PS K+ L Q N LP E+++EIL+RLP KSLLKFRCVCKSW L Sbjct: 35 LLLPPSSVQKQSHLKQSQQNQAMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLI 94 Query: 176 YDPTFTKMHF----ARTLGSHDVSILATTVNHFYKEFEMIEVDDEENEILSGLGFRKYSK 343 DP F K H TL +H IL+ T F+ + + ++ Sbjct: 95 SDPYFIKKHLHLSKQSTLFNHHRIILSATTAEFHLKSCSVS--------------SLFNS 140 Query: 344 THIYCVDGSSGFEVQFKIKDPFVESYYYEDLEIVGSCNGIVC 469 T C D + + +K+ Y IVGSCNG++C Sbjct: 141 TSTVCED------LNYPVKNK------YRHDGIVGSCNGLLC 170 >ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max] Length = 405 Score = 74.3 bits (181), Expect = 9e-12 Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 5/135 (3%) Frame = +2 Query: 80 LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGS-----HDVSILA 244 LP E+++EIL+RLP KSLL+FRCVCKSW +L YDP F K H + S H + + A Sbjct: 49 LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILSA 108 Query: 245 TTVNHFYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVESYY 424 TT K + + + + + E+ + +K+ F Sbjct: 109 TTAEFHLKSCSLSSLFNNLSTVCD---------------------ELNYPVKNKFRHD-- 145 Query: 425 YEDLEIVGSCNGIVC 469 IVGSCNG++C Sbjct: 146 ----GIVGSCNGLLC 156 >ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis] gi|223534840|gb|EEF36529.1| conserved hypothetical protein [Ricinus communis] Length = 371 Score = 73.9 bits (180), Expect = 1e-11 Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 4/138 (2%) Frame = +2 Query: 71 MANLPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGS----HDVSI 238 + N+P EI+IEIL RLP KSLLK+RCVC+SW +L + +F H ++ H ++ Sbjct: 2 LENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYAL 61 Query: 239 LATTVNHFYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVES 418 + KE ++ +DD+ G F V ++ PF Sbjct: 62 VKQKSVPDCKERFILYIDDD---------------------SGDEPFRVYQELDFPFKGE 100 Query: 419 YYYEDLEIVGSCNGIVCL 472 Y LEI+ SCNG+VCL Sbjct: 101 RY---LEIISSCNGLVCL 115 >ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1| predicted protein [Populus trichocarpa] Length = 360 Score = 73.9 bits (180), Expect = 1e-11 Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 2/136 (1%) Frame = +2 Query: 71 MANLPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGSHDVSILATT 250 M+ LP EII++ILT LPAKSL+KF+CVC+SWR+L DP F K+H R +++ Sbjct: 1 MSKLPQEIIVDILTYLPAKSLIKFKCVCRSWRSLISDPQFAKLHLKRAHEDENIN----- 55 Query: 251 VNHFYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVESY--Y 424 ++ +I D YS DG +G K+ P ES+ Sbjct: 56 -----RQRLLIAADP------------LYSVDFEAASDGDNG-NTLVKLSYPNAESHNDS 97 Query: 425 YEDLEIVGSCNGIVCL 472 + +GSC+GIVC+ Sbjct: 98 FAVGLFLGSCDGIVCI 113