BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030379
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    79   5e-13
gb|AFK44336.1| unknown [Lotus japonicus]                               77   2e-12
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    74   9e-12
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    74   1e-11
ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/131 (32%), Positives = 68/131 (51%)
 Frame = +2

Query: 80  LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGSHDVSILATTVNH 259
           LP E++ EIL+RLP +SL++ +CVCKSW T+  DP F KMH  R+  + + S+++     
Sbjct: 94  LPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSARNPNFSVVS----- 148

Query: 260 FYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVESYYYEDLE 439
               +E    DD+++  +           HI               KDP+   +  +  E
Sbjct: 149 ----YETPSFDDDDHRFVPFPAGSLLDNPHITFP------------KDPYYLLHDKDCRE 192

Query: 440 IVGSCNGIVCL 472
           ++GSCNG+VCL
Sbjct: 193 VIGSCNGLVCL 203


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
 Frame = +2

Query: 20  VIVRPSISMKKIELVQQMAN--------LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLT 175
           +++ PS   K+  L Q   N        LP E+++EIL+RLP KSLLKFRCVCKSW  L 
Sbjct: 35  LLLPPSSVQKQSHLKQSQQNQAMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLI 94

Query: 176 YDPTFTKMHF----ARTLGSHDVSILATTVNHFYKEFEMIEVDDEENEILSGLGFRKYSK 343
            DP F K H       TL +H   IL+ T   F+ +   +                 ++ 
Sbjct: 95  SDPYFIKKHLHLSKQSTLFNHHRIILSATTAEFHLKSCSVS--------------SLFNS 140

Query: 344 THIYCVDGSSGFEVQFKIKDPFVESYYYEDLEIVGSCNGIVC 469
           T   C D      + + +K+       Y    IVGSCNG++C
Sbjct: 141 TSTVCED------LNYPVKNK------YRHDGIVGSCNGLLC 170


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
 Frame = +2

Query: 80  LPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGS-----HDVSILA 244
           LP E+++EIL+RLP KSLL+FRCVCKSW +L YDP F K H   +  S     H + + A
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILSA 108

Query: 245 TTVNHFYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVESYY 424
           TT     K   +  + +  + +                       E+ + +K+ F     
Sbjct: 109 TTAEFHLKSCSLSSLFNNLSTVCD---------------------ELNYPVKNKFRHD-- 145

Query: 425 YEDLEIVGSCNGIVC 469
                IVGSCNG++C
Sbjct: 146 ----GIVGSCNGLLC 156


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
 Frame = +2

Query: 71  MANLPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGS----HDVSI 238
           + N+P EI+IEIL RLP KSLLK+RCVC+SW +L  + +F   H   ++      H  ++
Sbjct: 2   LENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYAL 61

Query: 239 LATTVNHFYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVES 418
           +        KE  ++ +DD+                      G   F V  ++  PF   
Sbjct: 62  VKQKSVPDCKERFILYIDDD---------------------SGDEPFRVYQELDFPFKGE 100

Query: 419 YYYEDLEIVGSCNGIVCL 472
            Y   LEI+ SCNG+VCL
Sbjct: 101 RY---LEIISSCNGLVCL 115


>ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
 Frame = +2

Query: 71  MANLPHEIIIEILTRLPAKSLLKFRCVCKSWRTLTYDPTFTKMHFARTLGSHDVSILATT 250
           M+ LP EII++ILT LPAKSL+KF+CVC+SWR+L  DP F K+H  R     +++     
Sbjct: 1   MSKLPQEIIVDILTYLPAKSLIKFKCVCRSWRSLISDPQFAKLHLKRAHEDENIN----- 55

Query: 251 VNHFYKEFEMIEVDDEENEILSGLGFRKYSKTHIYCVDGSSGFEVQFKIKDPFVESY--Y 424
                ++  +I  D              YS       DG +G     K+  P  ES+   
Sbjct: 56  -----RQRLLIAADP------------LYSVDFEAASDGDNG-NTLVKLSYPNAESHNDS 97

Query: 425 YEDLEIVGSCNGIVCL 472
           +     +GSC+GIVC+
Sbjct: 98  FAVGLFLGSCDGIVCI 113