BLASTX nr result

ID: Coptis24_contig00030356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030356
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514370.1| peroxisomal membrane protein, putative [Rici...   228   4e-58
ref|XP_003595873.1| ABC transporter D family member [Medicago tr...   227   7e-58
gb|ABN08200.1| AAA ATPase; ABC transporter, transmembrane region...   227   7e-58
ref|XP_002315097.1| peroxisomal membrane ABC transporter family,...   226   1e-57
ref|XP_004140024.1| PREDICTED: ABC transporter D family member 2...   225   3e-57

>ref|XP_002514370.1| peroxisomal membrane protein, putative [Ricinus communis]
           gi|223546467|gb|EEF47966.1| peroxisomal membrane
           protein, putative [Ricinus communis]
          Length = 742

 Score =  228 bits (581), Expect = 4e-58
 Identities = 115/120 (95%), Positives = 120/120 (100%)
 Frame = +3

Query: 3   EADFRYGLVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYR 182
           EADFRYGLVRVRENAESIAFYGGE+NEMQLLLQRF++AFENL++LLISSRNLEFFTNGYR
Sbjct: 292 EADFRYGLVRVRENAESIAFYGGEDNEMQLLLQRFRNAFENLTELLISSRNLEFFTNGYR 351

Query: 183 YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG 362
           YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG
Sbjct: 352 YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG 411


>ref|XP_003595873.1| ABC transporter D family member [Medicago truncatula]
           gi|355484921|gb|AES66124.1| ABC transporter D family
           member [Medicago truncatula]
          Length = 906

 Score =  227 bits (579), Expect = 7e-58
 Identities = 115/120 (95%), Positives = 120/120 (100%)
 Frame = +3

Query: 3   EADFRYGLVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYR 182
           EADFRYGLVRVRENAESIAFYGGEE+EMQLLLQRFKSAFENL+QLLISSRNLEFFTNGYR
Sbjct: 461 EADFRYGLVRVRENAESIAFYGGEESEMQLLLQRFKSAFENLTQLLISSRNLEFFTNGYR 520

Query: 183 YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG 362
           Y+IQ+LPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVI+RLG
Sbjct: 521 YVIQVLPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLG 580


>gb|ABN08200.1| AAA ATPase; ABC transporter, transmembrane region, type 1 [Medicago
           truncatula]
          Length = 613

 Score =  227 bits (579), Expect = 7e-58
 Identities = 115/120 (95%), Positives = 120/120 (100%)
 Frame = +3

Query: 3   EADFRYGLVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYR 182
           EADFRYGLVRVRENAESIAFYGGEE+EMQLLLQRFKSAFENL+QLLISSRNLEFFTNGYR
Sbjct: 168 EADFRYGLVRVRENAESIAFYGGEESEMQLLLQRFKSAFENLTQLLISSRNLEFFTNGYR 227

Query: 183 YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG 362
           Y+IQ+LPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVI+RLG
Sbjct: 228 YVIQVLPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLG 287


>ref|XP_002315097.1| peroxisomal membrane ABC transporter family, PMP family [Populus
           trichocarpa] gi|222864137|gb|EEF01268.1| peroxisomal
           membrane ABC transporter family, PMP family [Populus
           trichocarpa]
          Length = 651

 Score =  226 bits (576), Expect = 1e-57
 Identities = 115/120 (95%), Positives = 120/120 (100%)
 Frame = +3

Query: 3   EADFRYGLVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYR 182
           EADFRYGLVRVRENAESIAF+GGEENE+QLLLQRFKSAFENL++LLISSRNLEFFT+GYR
Sbjct: 206 EADFRYGLVRVRENAESIAFFGGEENEIQLLLQRFKSAFENLTRLLISSRNLEFFTSGYR 265

Query: 183 YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG 362
           YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG
Sbjct: 266 YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG 325


>ref|XP_004140024.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
           [Cucumis sativus] gi|449475984|ref|XP_004154606.1|
           PREDICTED: ABC transporter D family member 2,
           chloroplastic-like [Cucumis sativus]
          Length = 773

 Score =  225 bits (573), Expect = 3e-57
 Identities = 112/120 (93%), Positives = 119/120 (99%)
 Frame = +3

Query: 3   EADFRYGLVRVRENAESIAFYGGEENEMQLLLQRFKSAFENLSQLLISSRNLEFFTNGYR 182
           EADFRYGLVR+RENAESIAFYGGEENEMQL+LQRF+SA ENL++LLISSRNLEFFTNGYR
Sbjct: 318 EADFRYGLVRIRENAESIAFYGGEENEMQLILQRFRSAVENLTKLLISSRNLEFFTNGYR 377

Query: 183 YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVIDRLG 362
           YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFS+IVYQFQAISAFSA+IDRLG
Sbjct: 378 YLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSIIVYQFQAISAFSAIIDRLG 437


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