BLASTX nr result

ID: Coptis24_contig00030345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030345
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...    57   2e-06
ref|XP_002268806.2| PREDICTED: putative disease resistance RPP13...    57   2e-06
gb|EEC70626.1| hypothetical protein OsI_01890 [Oryza sativa Indi...    57   2e-06
emb|CAN62744.1| hypothetical protein VITISV_019639 [Vitis vinifera]    57   2e-06
ref|XP_002263541.2| PREDICTED: putative disease resistance prote...    56   3e-06

>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223548089|gb|EEF49581.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = -3

Query: 210 CIKFCYLFPKTHEFNKDDIIQLWIAEGFI-PVTHIRLETTAGLYIEALQELSIFQFS 43
           C  FC +FPK HEF+K+D++ LW+AEGF+ P    RLE  A  Y + L   S FQ S
Sbjct: 420 CFVFCSIFPKDHEFDKEDLVLLWMAEGFVHPKGRRRLEDVASDYFDDLLLRSFFQQS 476


>ref|XP_002268806.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1629

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = -3

Query: 252 LVSDKSLDGEVMWSCIKFCYLFPKTHEFNKDDIIQLWIAEGFIPVTH--IRLETTAGLYI 79
           ++S   L   + W C  +C +FPK +EFNKDD++ LW+AEGF+  T    R E     Y 
Sbjct: 421 MISYHHLPSHLKW-CFAYCSMFPKDYEFNKDDLVLLWMAEGFLQKTKEAARPEDLGSKYF 479

Query: 78  EALQELSIFQFS 43
           + L   S FQ S
Sbjct: 480 DDLFSRSFFQHS 491


>gb|EEC70626.1| hypothetical protein OsI_01890 [Oryza sativa Indica Group]
          Length = 372

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -3

Query: 219 MWSCIKFCYLFPKTHEFNKDDIIQLWIAEGFIP-VTHIRLETTAGLYIEALQELSIFQ 49
           M  C  FC +FPK +E +KD ++QLWIA G IP +  IRLETT       L   S FQ
Sbjct: 293 MKQCFAFCAIFPKDYEIDKDKLVQLWIANGLIPEIKDIRLETTGEGIFNELASRSFFQ 350


>emb|CAN62744.1| hypothetical protein VITISV_019639 [Vitis vinifera]
          Length = 1420

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = -3

Query: 252 LVSDKSLDGEVMWSCIKFCYLFPKTHEFNKDDIIQLWIAEGFIPVTH--IRLETTAGLYI 79
           ++S   L   + W C  +C +FPK +EFNKDD++ LW+AEGF+  T    R E     Y 
Sbjct: 421 MISYHHLPSHLKW-CFAYCSMFPKDYEFNKDDLVLLWMAEGFLQKTKEAARPEDLGSKYF 479

Query: 78  EALQELSIFQFS 43
           + L   S FQ S
Sbjct: 480 DDLFSRSFFQHS 491


>ref|XP_002263541.2| PREDICTED: putative disease resistance protein At3g14460 [Vitis
           vinifera]
          Length = 1340

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -3

Query: 210 CIKFCYLFPKTHEFNKDDIIQLWIAEGFI--PVTHIRLETTAGLYIEALQELSIFQFS 43
           C  +C +FPK +EF KD ++ LWIAEGF+  P  + RLE   G Y + L   S FQ S
Sbjct: 426 CFAYCAIFPKDYEFKKDSLVLLWIAEGFVQQPKGNKRLEEAGGEYFQDLVSRSFFQQS 483


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