BLASTX nr result

ID: Coptis24_contig00030332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030332
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634420.1| PREDICTED: uncharacterized protein LOC100254...   112   7e-23
emb|CBI19243.3| unnamed protein product [Vitis vinifera]              112   7e-23
ref|XP_002272480.2| PREDICTED: uncharacterized protein LOC100242...   111   2e-22
ref|XP_003615261.1| hypothetical protein MTR_5g065900 [Medicago ...   108   2e-21
ref|XP_003544237.1| PREDICTED: uncharacterized protein LOC100779...   105   8e-21

>ref|XP_003634420.1| PREDICTED: uncharacterized protein LOC100254008 [Vitis vinifera]
          Length = 1304

 Score =  112 bits (281), Expect = 7e-23
 Identities = 63/120 (52%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
 Frame = +3

Query: 159 MFTQGLDPNALKWVREGSGGKQREGEQFNIANQRTEFSSLRNGSGRGFGLPPTSKYRSGH 338
           MFT+GLD NA++WVRE       +    +I+N       +R G+GRGFGLPP SK+RSGH
Sbjct: 50  MFTEGLDKNAVRWVRE-------KELSHSISNPIHRIDPVR-GAGRGFGLPPPSKFRSGH 101

Query: 339 LPSGLIPTSRTIPVSKVESEFGSDMD---TSDSEDDVYGGRYSLESSPQDHLHHRVPERS 509
           LPS  IP SRTIP    + E GSD D   T+DSE++VYGGRYSL+SSP D   +R+P  +
Sbjct: 102 LPSSTIPVSRTIPGDNDDIESGSDNDNDLTTDSEEEVYGGRYSLDSSPPD---NRIPSNA 158


>emb|CBI19243.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  112 bits (281), Expect = 7e-23
 Identities = 63/120 (52%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
 Frame = +3

Query: 159 MFTQGLDPNALKWVREGSGGKQREGEQFNIANQRTEFSSLRNGSGRGFGLPPTSKYRSGH 338
           MFT+GLD NA++WVRE       +    +I+N       +R G+GRGFGLPP SK+RSGH
Sbjct: 1   MFTEGLDKNAVRWVRE-------KELSHSISNPIHRIDPVR-GAGRGFGLPPPSKFRSGH 52

Query: 339 LPSGLIPTSRTIPVSKVESEFGSDMD---TSDSEDDVYGGRYSLESSPQDHLHHRVPERS 509
           LPS  IP SRTIP    + E GSD D   T+DSE++VYGGRYSL+SSP D   +R+P  +
Sbjct: 53  LPSSTIPVSRTIPGDNDDIESGSDNDNDLTTDSEEEVYGGRYSLDSSPPD---NRIPSNA 109


>ref|XP_002272480.2| PREDICTED: uncharacterized protein LOC100242393 [Vitis vinifera]
          Length = 1400

 Score =  111 bits (277), Expect = 2e-22
 Identities = 85/238 (35%), Positives = 118/238 (49%), Gaps = 30/238 (12%)
 Frame = +3

Query: 156 RMFTQGLDPNALKWVREGSGGKQREGEQFNIANQRTE---FSSLRNGSGRGFGLPPTSKY 326
           +MFTQGLD NALKWV    G ++++     I  Q  +    +SLRNG GRGFGLPP+ K+
Sbjct: 183 KMFTQGLDSNALKWV----GEEKKKDISVLIPTQGLQCDPIASLRNG-GRGFGLPPSDKF 237

Query: 327 RSGHLPSGLIPTSRTIPVSKVESEFGSDMDT-SDSEDDVYGGRYSLESSPQDHLHHRVPE 503
           RSG++PSG+IP S  IP S  +S  GSDMD  +DSEDDV+ G+ SL+SSPQD   +R+P 
Sbjct: 238 RSGYMPSGIIPVSHAIPRSGDDSGSGSDMDIGTDSEDDVHIGQDSLDSSPQD---NRIPV 294

Query: 504 RSVGVQYSAGSLRHD---------------HIXXXXXXXXXYASTQVESNTSSLRYR--- 629
            S G +Y     +H                 +          + +   S  SS ++R   
Sbjct: 295 -SAGPKYPTPLQKHRCTEDVERMGDGGGGFSVGRHGCTEDGTSDSAAGSGVSSTQFRSLG 353

Query: 630 --------GTXXXXXXXXXXXXXRPNVVVSNKKDINVTNLQHKKPSDNEVPSAPPFSG 779
                    T                 +V   +D+    +Q K   D+++PSAPPF G
Sbjct: 354 GVMPHRAMNTSESNVSLRTDTEMAAEQLVEWPQDVYARGMQ-KLSGDDDIPSAPPFVG 410


>ref|XP_003615261.1| hypothetical protein MTR_5g065900 [Medicago truncatula]
           gi|355516596|gb|AES98219.1| hypothetical protein
           MTR_5g065900 [Medicago truncatula]
          Length = 1237

 Score =  108 bits (269), Expect = 2e-21
 Identities = 63/116 (54%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
 Frame = +3

Query: 159 MFTQGLDPNALKWVREGSGGKQREGEQFNIA-NQRTEFSSLRNGSGRGFGLPPTSKYRSG 335
           MFT+GLD NAL+WVRE      +E    N A   R   S +++G GRGFGLPP SK+RSG
Sbjct: 1   MFTEGLDKNALRWVRE------KEVPFSNTAMRSRDPISGMKSGGGRGFGLPPPSKFRSG 54

Query: 336 HLPSGLIPTSRTIPVSKVESEFGSDMDTS-DSEDDVYGGRYSLESSPQDHLHHRVP 500
           HLP+  +P S    V   +S   SDMD S DSE++VYGGRYSL+SSPQD    RVP
Sbjct: 55  HLPANKLPVS---AVETFDSRSNSDMDASVDSEEEVYGGRYSLDSSPQD---SRVP 104


>ref|XP_003544237.1| PREDICTED: uncharacterized protein LOC100779084 [Glycine max]
          Length = 1233

 Score =  105 bits (263), Expect = 8e-21
 Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
 Frame = +3

Query: 159 MFTQGLDPNALKWVREGSGGKQREGEQFNIANQRTEFSSLRNGSGRGFGLPPTSKYRSGH 338
           MFT+GLD NAL+WVRE    K+       + ++    S +++G+GRGFGLPP SK+RSGH
Sbjct: 1   MFTEGLDRNALRWVRE----KEVPFSNTALRSRNDPISGMKSGAGRGFGLPPPSKFRSGH 56

Query: 339 LPSGLIPTSRTIPVSKVESEFGSDMDTS-DSEDDVYGGRYSLESSPQDHLHHRVP 500
           LP+  IP S  +     +S   SD D S +SE++VYGGRYSL+SSPQD    RVP
Sbjct: 57  LPANAIPVSTVMLGETGDSGSNSDNDDSIESEEEVYGGRYSLDSSPQD---RRVP 108


Top