BLASTX nr result

ID: Coptis24_contig00030329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030329
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-lik...   155   3e-36
ref|XP_002520250.1| r2r3-myb transcription factor, putative [Ric...   154   1e-35
ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|2...   154   1e-35
emb|CAN76166.1| hypothetical protein VITISV_041798 [Vitis vinifera]   153   1e-35
ref|XP_003527964.1| PREDICTED: transcription factor LAF1-like [G...   151   6e-35

>ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-like [Vitis vinifera]
           gi|302142744|emb|CBI19947.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  155 bits (393), Expect = 3e-36
 Identities = 80/121 (66%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
 Frame = -1

Query: 369 GKSCRLRWFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWH 190
           GKSCRLRWFNQLDPRINRKPFT    ERLLAAHR+HGNKWALI+RLFPGRTDN+VKNHWH
Sbjct: 48  GKSCRLRWFNQLDPRINRKPFTEEEEERLLAAHRIHGNKWALISRLFPGRTDNAVKNHWH 107

Query: 189 VIMARRQRERSKLYGKRSSHDFFHSVTGTTTSNSFPLMSLTTHGEYYSKESR-ESSTILE 13
           VIMAR+QRE+SKL GKRS  D        T+SN F      +  + YS  +R E+S + E
Sbjct: 108 VIMARKQREQSKLCGKRSYKDVLSD--SNTSSNGF--RGSNSRSQQYSSANRLENSRLFE 163

Query: 12  F 10
           F
Sbjct: 164 F 164


>ref|XP_002520250.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223540469|gb|EEF42036.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 346

 Score =  154 bits (388), Expect = 1e-35
 Identities = 83/127 (65%), Positives = 94/127 (74%), Gaps = 6/127 (4%)
 Frame = -1

Query: 369 GKSCRLRWFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWH 190
           GKSCRLRWFNQLDPRINR+PF+    ERLLAAHR HGNKWALIARLFPGRTDN+VKNHWH
Sbjct: 47  GKSCRLRWFNQLDPRINRRPFSEEEEERLLAAHRTHGNKWALIARLFPGRTDNAVKNHWH 106

Query: 189 VIMARRQRERSKLYGKRSSHDFFHSVTGT-TTSNSFPLMSLTTHGEYYSKESR---ESST 22
           VIMAR+QRE SK+ GKRS  +   S + T TT+N F L    +   + S  SR   E+ST
Sbjct: 107 VIMARKQREHSKISGKRSYQEGGLSDSNTITTTNDFHLRKSRSQDLFVSSSSRIGFENST 166

Query: 21  --ILEFR 7
              LEFR
Sbjct: 167 ARFLEFR 173


>ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|222856923|gb|EEE94470.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  154 bits (388), Expect = 1e-35
 Identities = 77/121 (63%), Positives = 91/121 (75%)
 Frame = -1

Query: 369 GKSCRLRWFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWH 190
           GKSCRLRWFNQLDPRINR+PF+    ERLLAAHR+HGNKWALIARLFPGRTDN+VKNHWH
Sbjct: 55  GKSCRLRWFNQLDPRINRRPFSEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWH 114

Query: 189 VIMARRQRERSKLYGKRSSHDFFHSVTGTTTSNSFPLMSLTTHGEYYSKESRESSTILEF 10
           VIMARRQRE+SKL GKRS  D   +++ +  +NS           + S+   + S +LEF
Sbjct: 115 VIMARRQREQSKLCGKRSYQD---NLSESNATNSSHAGKSRAQDVFNSRIGFDDSRVLEF 171

Query: 9   R 7
           R
Sbjct: 172 R 172


>emb|CAN76166.1| hypothetical protein VITISV_041798 [Vitis vinifera]
          Length = 320

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/120 (65%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
 Frame = -1

Query: 366 KSCRLRWFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWHV 187
           KSCRLRWFNQLDPRINRKPFT    ERLLAAHR+HGNKWALI+RLFPGRTDN+VKNHWHV
Sbjct: 48  KSCRLRWFNQLDPRINRKPFTEEEEERLLAAHRIHGNKWALISRLFPGRTDNAVKNHWHV 107

Query: 186 IMARRQRERSKLYGKRSSHDFFHSVTGTTTSNSFPLMSLTTHGEYYSKESR-ESSTILEF 10
           IMAR+QRE+SKL GKRS  D        T+SN F      +  + YS  +R E+S + EF
Sbjct: 108 IMARKQREQSKLCGKRSYKDVLSD--SNTSSNGF--RGSNSRSQQYSSANRLENSRLFEF 163


>ref|XP_003527964.1| PREDICTED: transcription factor LAF1-like [Glycine max]
          Length = 331

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/89 (78%), Positives = 77/89 (86%)
 Frame = -1

Query: 369 GKSCRLRWFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWH 190
           GKSCRLRWFNQLDPRINR+PFT    ERLLAAHR+HGNKWALIARLFPGRTDN+VKNHWH
Sbjct: 50  GKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWH 109

Query: 189 VIMARRQRERSKLYGKRSSHDFFHSVTGT 103
           VIMAR+QRE+SKL GKRS  D ++    T
Sbjct: 110 VIMARKQREQSKLCGKRSFQDVYNDSNNT 138


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