BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030328
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16436.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>emb|CBI16436.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
 Frame = -3

Query: 211 NQIKQIHAQILTNGLNELHPIFLHDLLQ----SSTASFQYTHQVFDQLPTPDEFTWATAI 44
           NQIKQ HA ++T GL  LHPI  + LL+    SS  S  Y HQ+FDQ+P PD F + T I
Sbjct: 2   NQIKQTHAHLITTGLI-LHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMI 60

Query: 43  R 41
           +
Sbjct: 61  K 61


>ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
 Frame = -3

Query: 211 NQIKQIHAQILTNGLNELHPIFLHDLLQ----SSTASFQYTHQVFDQLPTPDEFTWATAI 44
           NQIKQ HA ++T GL  LHPI  + LL+    SS  S  Y HQ+FDQ+P PD F + T I
Sbjct: 29  NQIKQTHAHLITTGLI-LHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMI 87

Query: 43  R 41
           +
Sbjct: 88  K 88


>ref|XP_002303536.1| predicted protein [Populus trichocarpa] gi|222840968|gb|EEE78515.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
 Frame = -3

Query: 211 NQIKQIHAQILTNGLNELHPIFLHDLLQSSTAS----FQYTHQVFDQLPTPDEFTWATAI 44
           NQ KQ HA I+ NG N L P+ +  +L S+  +     QY H +   LP PD F+W  AI
Sbjct: 37  NQAKQTHACIIINGFNNLEPLLVRQILLSARNNPRRISQYVHSILYHLPHPDSFSWGWAI 96

Query: 43  RY 38
           RY
Sbjct: 97  RY 98