BLASTX nr result

ID: Coptis24_contig00030313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030313
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   5e-06
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1   IALFPHAQVQTFANASSDHISLIINLENKEERN--PRPFKFFEMWLANDTCRPVIENAWN 174
           ++LFP  QV       SDH  L++     +E N  PRPF+F   WL++  C  +I++ W 
Sbjct: 204 VSLFPSLQVSILRRNLSDHCPLLVK---SDELNWGPRPFRFQNCWLSHPGCLQIIKDVWA 260

Query: 175 AITHDLPDSNLIHRMHKTRTDLTLWNKFVFG 267
           + T      NL  ++ +T+  L +WN   FG
Sbjct: 261 SHT----SGNLTDKLKETKKRLKIWNSSEFG 287


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 20/81 (24%), Positives = 45/81 (55%)
 Frame = +1

Query: 10  FPHAQVQTFANASSDHISLIINLENKEERNPRPFKFFEMWLANDTCRPVIENAWNAITHD 189
           FP ++ +   +  SDH  +++ +   ++   +PF+FF+MW+ +D   P+++  W+  +  
Sbjct: 589 FPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRG 648

Query: 190 LPDSNLIHRMHKTRTDLTLWN 252
            P   L  ++ K + +L L+N
Sbjct: 649 CPMYQLCCKLRKLKQELKLFN 669


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