BLASTX nr result

ID: Coptis24_contig00030308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030308
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298215.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104
ref|XP_002516060.1| Mitochondrial carnitine/acylcarnitine carrie...   376   e-102
ref|XP_002303286.1| predicted protein [Populus trichocarpa] gi|2...   375   e-102
ref|XP_003529624.1| PREDICTED: mitochondrial carnitine/acylcarni...   358   1e-96
ref|NP_178108.1| Mitochondrial substrate carrier family protein ...   358   2e-96

>ref|XP_002298215.1| predicted protein [Populus trichocarpa] gi|222845473|gb|EEE83020.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  385 bits (989), Expect = e-104
 Identities = 199/283 (70%), Positives = 217/283 (76%), Gaps = 5/283 (1%)
 Frame = +1

Query: 295  MDFWPEFLANSWGREXXXXXXXXXXXXISGYPLDTLRIRLQQPTNTXXXXXXXXXXXXXE 474
            MDFWPEFLA+SWGRE            ISGYPLDTLRIRLQQP N+             E
Sbjct: 1    MDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRIRLQQP-NSGSAFSILRRVMAGE 59

Query: 475  GPLSLYRGMTAPLASVTFQNAMVFQVYAVLSRAFHSSFTNCDPPSYKCVALGGVGTGALQ 654
            GP +LYRGM APLASVTFQNAMVFQ YA+LSRAF SS +  DPPSYK V LGGVGTGA+Q
Sbjct: 60   GPAALYRGMGAPLASVTFQNAMVFQTYAILSRAFDSSVSASDPPSYKGVVLGGVGTGAIQ 119

Query: 655  SLMLSPVELVKIRLQLQVCQQDN-----HQKGPLSVAKDIFIRQGIRGMYRGLTITVLRD 819
            S+MLSPVELVKIRLQLQ     N       KGP+SVAK I   +GI+G+YRG  ITVLRD
Sbjct: 120  SIMLSPVELVKIRLQLQNVSHANLHGAASYKGPVSVAKSILKTEGIKGIYRGFVITVLRD 179

Query: 820  APAHGVYFWTYEYTREKLHPGCRKSGQESLKTMLFAGGLAGVASWMCCYPLDVVKTRLQA 999
            APAHGVYFWTYEY RE+ HPGCRK+G ESL+TML AGGLAGVASW+CCYPLDVVKTRLQA
Sbjct: 180  APAHGVYFWTYEYMREQFHPGCRKNGHESLRTMLTAGGLAGVASWLCCYPLDVVKTRLQA 239

Query: 1000 QSQTSIDHLKPKYSGILDCFRKSVLEEGYCVLWRGLGTAVTRA 1128
            Q+ +S   L  KY GILDCFR+SV EEGYCVLWRGLGTAV RA
Sbjct: 240  QTPSSSSPL--KYKGILDCFRRSVKEEGYCVLWRGLGTAVARA 280


>ref|XP_002516060.1| Mitochondrial carnitine/acylcarnitine carrier protein, putative
            [Ricinus communis] gi|223544965|gb|EEF46480.1|
            Mitochondrial carnitine/acylcarnitine carrier protein,
            putative [Ricinus communis]
          Length = 309

 Score =  376 bits (965), Expect = e-102
 Identities = 193/283 (68%), Positives = 220/283 (77%), Gaps = 5/283 (1%)
 Frame = +1

Query: 295  MDFWPEFLANSWGREXXXXXXXXXXXXISGYPLDTLRIRLQQPTNTXXXXXXXXXXXXXE 474
            MDFWPEFLA+SWGRE            ISGYPLDTLRIR QQ +N+             +
Sbjct: 1    MDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRIRQQQNSNSGSALSILRRVISTD 60

Query: 475  GPLSLYRGMTAPLASVTFQNAMVFQVYAVLSRAFHSSFTNCDPPSYKCVALGGVGTGALQ 654
            GP +LYRGM APLASVTFQNAMVFQ+YA+LSRAF SS +  DPPSYK VALGGVGTGALQ
Sbjct: 61   GPGALYRGMGAPLASVTFQNAMVFQIYAILSRAFDSSVSINDPPSYKGVALGGVGTGALQ 120

Query: 655  SLMLSPVELVKIRLQLQ-VCQQDNHQ----KGPLSVAKDIFIRQGIRGMYRGLTITVLRD 819
            SLML+PVEL+KIRLQLQ   Q   HQ    KGP+SVAK I   +G+RG+YRG +ITVLRD
Sbjct: 121  SLMLTPVELIKIRLQLQDKSQSKPHQLDCHKGPMSVAKTILRTEGLRGIYRGFSITVLRD 180

Query: 820  APAHGVYFWTYEYTREKLHPGCRKSGQESLKTMLFAGGLAGVASWMCCYPLDVVKTRLQA 999
            AP+HG YFWTYEY RE+LHPGCRKSGQE ++TML AGGLAGVASW+CCYPLDV+KTRLQA
Sbjct: 181  APSHGFYFWTYEYMREQLHPGCRKSGQERIRTMLVAGGLAGVASWVCCYPLDVLKTRLQA 240

Query: 1000 QSQTSIDHLKPKYSGILDCFRKSVLEEGYCVLWRGLGTAVTRA 1128
            Q+ +S      KY+GILDCF++S+ EEGY VLWRGLGTAV RA
Sbjct: 241  QTPSS----PQKYNGILDCFQRSITEEGYRVLWRGLGTAVARA 279


>ref|XP_002303286.1| predicted protein [Populus trichocarpa] gi|222840718|gb|EEE78265.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  375 bits (964), Expect = e-102
 Identities = 194/283 (68%), Positives = 218/283 (77%), Gaps = 5/283 (1%)
 Frame = +1

Query: 295  MDFWPEFLANSWGREXXXXXXXXXXXXISGYPLDTLRIRLQQPTNTXXXXXXXXXXXXXE 474
            MDFWPEF+A+SWGRE            ISGYPLDTLRIRLQQ +N+             E
Sbjct: 1    MDFWPEFIASSWGREFVAGGFGGIAGIISGYPLDTLRIRLQQ-SNSGSAFSILRRVMSSE 59

Query: 475  GPLSLYRGMTAPLASVTFQNAMVFQVYAVLSRAFHSSFTNCDPPSYKCVALGGVGTGALQ 654
            GP +LYRGM APLASVTFQNAMVFQ YA+LSRA  SS +  DPPSYK VALGGVGTGA+Q
Sbjct: 60   GPAALYRGMGAPLASVTFQNAMVFQTYAILSRALDSSASANDPPSYKGVALGGVGTGAIQ 119

Query: 655  SLMLSPVELVKIRLQLQVCQQDNHQ-----KGPLSVAKDIFIRQGIRGMYRGLTITVLRD 819
            S++LSPVEL+KIRLQLQ     N Q     KGPLSVAK I   +G++GMYRG  ITVLRD
Sbjct: 120  SIILSPVELIKIRLQLQNRNHANLQEAASPKGPLSVAKSILKTEGLKGMYRGFVITVLRD 179

Query: 820  APAHGVYFWTYEYTREKLHPGCRKSGQESLKTMLFAGGLAGVASWMCCYPLDVVKTRLQA 999
            APA+GVYFWTYEY RE+ HPGCRK+GQES++TML AGGLAGVASW+CCYPLDVVKTRLQA
Sbjct: 180  APAYGVYFWTYEYMREQFHPGCRKNGQESVRTMLTAGGLAGVASWLCCYPLDVVKTRLQA 239

Query: 1000 QSQTSIDHLKPKYSGILDCFRKSVLEEGYCVLWRGLGTAVTRA 1128
            QS +S    + KY GILDCF +SV E+GYCVLWRGLGTAV RA
Sbjct: 240  QSPSS----QLKYKGILDCFSRSVKEDGYCVLWRGLGTAVARA 278


>ref|XP_003529624.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein
            CACL-like [Glycine max]
          Length = 303

 Score =  358 bits (920), Expect = 1e-96
 Identities = 186/279 (66%), Positives = 210/279 (75%), Gaps = 1/279 (0%)
 Frame = +1

Query: 295  MDFWPEFLANSWGREXXXXXXXXXXXXISGYPLDTLRIRLQQPTNTXXXXXXXXXXXXXE 474
            MDFWPEFLA+S GRE            ISGYPLDTLRIRLQ   N              E
Sbjct: 1    MDFWPEFLASSSGREFVAGGFGGIAGIISGYPLDTLRIRLQNSKN-GSAFTILRQMVSRE 59

Query: 475  GPLSLYRGMTAPLASVTFQNAMVFQVYAVLSRAFHSSFTNCDPPSYKCVALGGVGTGALQ 654
            GP SLYRGM APLASVTFQNAMVFQ YAVLSRAF SS +  DPPSYK VALGG GTGA+Q
Sbjct: 60   GPASLYRGMGAPLASVTFQNAMVFQTYAVLSRAFDSSVSAKDPPSYKGVALGGTGTGAIQ 119

Query: 655  SLMLSPVELVKIRLQLQVC-QQDNHQKGPLSVAKDIFIRQGIRGMYRGLTITVLRDAPAH 831
            SL++SPVEL K+RLQLQ   Q     KGPL +AK+I+ ++G+RG+YRGL +TV+RD P+H
Sbjct: 120  SLLISPVELTKVRLQLQNAGQMTETAKGPLMLAKNIWRKEGLRGIYRGLGVTVMRDGPSH 179

Query: 832  GVYFWTYEYTREKLHPGCRKSGQESLKTMLFAGGLAGVASWMCCYPLDVVKTRLQAQSQT 1011
            G+YFWTYEY RE+LHPGCRKSG+ESL TML AGGLAGV SW+ CYP DVVKTRLQAQ+ +
Sbjct: 180  GLYFWTYEYMREQLHPGCRKSGEESLNTMLIAGGLAGVTSWISCYPFDVVKTRLQAQTPS 239

Query: 1012 SIDHLKPKYSGILDCFRKSVLEEGYCVLWRGLGTAVTRA 1128
            SI     KY GI+DCF+KSV EEGY VLWRGLGT V RA
Sbjct: 240  SI-----KYKGIIDCFKKSVNEEGYGVLWRGLGTTVARA 273


>ref|NP_178108.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana]
            gi|75308939|sp|Q9CA93.1|BAC2_ARATH RecName:
            Full=Mitochondrial arginine transporter BAC2; AltName:
            Full=Mitochondrial basic amino acid carrier 2;
            Short=AtMBAC2 gi|12324589|gb|AAG52250.1|AC011717_18
            putative carnitine/acylcarnitine translocase; 50581-51656
            [Arabidopsis thaliana] gi|17529160|gb|AAL38806.1|
            putative carnitine/acylcarnitine translocase [Arabidopsis
            thaliana] gi|20465853|gb|AAM20031.1| putative
            carnitine/acylcarnitine translocase [Arabidopsis
            thaliana] gi|332198200|gb|AEE36321.1| Mitochondrial
            substrate carrier family protein [Arabidopsis thaliana]
          Length = 296

 Score =  358 bits (918), Expect = 2e-96
 Identities = 181/278 (65%), Positives = 207/278 (74%)
 Frame = +1

Query: 295  MDFWPEFLANSWGREXXXXXXXXXXXXISGYPLDTLRIRLQQPTNTXXXXXXXXXXXXXE 474
            MDFWPEF+A SWGRE            ISGYPLDTLRIR QQ + +             E
Sbjct: 1    MDFWPEFMATSWGREFVAGGFGGVAGIISGYPLDTLRIRQQQSSKSGSAFSILRRMLAIE 60

Query: 475  GPLSLYRGMTAPLASVTFQNAMVFQVYAVLSRAFHSSFTNCDPPSYKCVALGGVGTGALQ 654
            GP SLYRGM APLASVTFQNAMVFQ+YA+ SR+F SS    +PPSY+ VALGGV TGA+Q
Sbjct: 61   GPSSLYRGMAAPLASVTFQNAMVFQIYAIFSRSFDSSVPLVEPPSYRGVALGGVATGAVQ 120

Query: 655  SLMLSPVELVKIRLQLQVCQQDNHQKGPLSVAKDIFIRQGIRGMYRGLTITVLRDAPAHG 834
            SL+L+PVEL+KIRLQLQ       + GP+++AK I  RQG++G+YRGLTITVLRDAPAHG
Sbjct: 121  SLLLTPVELIKIRLQLQ-----QTKSGPITLAKSILRRQGLQGLYRGLTITVLRDAPAHG 175

Query: 835  VYFWTYEYTREKLHPGCRKSGQESLKTMLFAGGLAGVASWMCCYPLDVVKTRLQAQSQTS 1014
            +YFWTYEY RE+LHPGCRK+GQE+L+TML AGGLAGVASW+ CYPLDVVKTRLQ      
Sbjct: 176  LYFWTYEYVRERLHPGCRKTGQENLRTMLVAGGLAGVASWVACYPLDVVKTRLQQGHGA- 234

Query: 1015 IDHLKPKYSGILDCFRKSVLEEGYCVLWRGLGTAVTRA 1128
                   Y GI DCFRKSV +EGY VLWRGLGTAV RA
Sbjct: 235  -------YEGIADCFRKSVKQEGYTVLWRGLGTAVARA 265


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