BLASTX nr result
ID: Coptis24_contig00030307
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030307 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517217.1| brushy protein, putative [Ricinus communis] ... 134 6e-30 ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|2... 130 9e-29 ref|XP_004165445.1| PREDICTED: LOW QUALITY PROTEIN: protein TONS... 128 6e-28 ref|XP_004148671.1| PREDICTED: protein TONSOKU-like [Cucumis sat... 128 6e-28 ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinif... 125 3e-27 >ref|XP_002517217.1| brushy protein, putative [Ricinus communis] gi|223543588|gb|EEF45117.1| brushy protein, putative [Ricinus communis] Length = 1327 Score = 134 bits (338), Expect = 6e-30 Identities = 69/123 (56%), Positives = 89/123 (72%), Gaps = 7/123 (5%) Frame = -2 Query: 349 LDSDGNWSGALEAFEEGYRIAFEAKKPSIQISALDNMHYSHMIRFDDINEARKLQLKIQD 170 LD + +W GAL+AFEE YRIA EA PS+Q+SAL+NMHYSHMIRFD++ EAR+LQ ++ + Sbjct: 429 LDCNDDWVGALKAFEESYRIAVEANLPSVQLSALENMHYSHMIRFDNVEEARRLQNEMSN 488 Query: 169 LKESTVTDPKPQN----CCSETDTEGDDDLSDNRSNACESPRISESSLTRSKTR---EDL 11 LK+S + + QN CCSETDT+ DDD SDNRSN SP+ + S T+SK E+L Sbjct: 489 LKQSKRRELETQNLARDCCSETDTDEDDDFSDNRSNPSHSPKNNSSGCTKSKNLAGVEEL 548 Query: 10 MDD 2 DD Sbjct: 549 NDD 551 >ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|222852793|gb|EEE90340.1| predicted protein [Populus trichocarpa] Length = 1353 Score = 130 bits (328), Expect = 9e-29 Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 7/123 (5%) Frame = -2 Query: 349 LDSDGNWSGALEAFEEGYRIAFEAKKPSIQISALDNMHYSHMIRFDDINEARKLQLKIQD 170 LD DG+W GAL AFEEGYRIA A PS+Q+SAL+NMHYSHMIRFD+ EAR+LQ +I+ Sbjct: 431 LDCDGDWMGALNAFEEGYRIAVNANLPSVQLSALENMHYSHMIRFDNEEEARRLQHEIER 490 Query: 169 LKESTVTDPKPQN----CCSETDTEGDDDLSDNRSNACESPRISESSLTRSKT---REDL 11 LK S T+ + QN CCSETDT+GDD LSD RSNA S I++S RSK+ E L Sbjct: 491 LK-SKNTELERQNLATDCCSETDTDGDDHLSDCRSNASCSQEINKSGSARSKSLAGAEGL 549 Query: 10 MDD 2 DD Sbjct: 550 DDD 552 >ref|XP_004165445.1| PREDICTED: LOW QUALITY PROTEIN: protein TONSOKU-like [Cucumis sativus] Length = 1342 Score = 128 bits (321), Expect = 6e-28 Identities = 65/117 (55%), Positives = 85/117 (72%), Gaps = 5/117 (4%) Frame = -2 Query: 346 DSDGNWSGALEAFEEGYRIAFEAKKPSIQISALDNMHYSHMIRFDDINEARKLQLKIQDL 167 D DG W+ AL+AFEE YRIA EAK PS+Q+SAL+NMHYSHMIRFD+ EAR+LQ +I L Sbjct: 430 DCDGKWTEALDAFEESYRIAVEAKLPSVQLSALENMHYSHMIRFDNAEEARRLQCQIDQL 489 Query: 166 KESTVT--DPKPQNCCSETDTEGDDDLSDNRSNAC---ESPRISESSLTRSKTREDL 11 KE T + D + ++CCSETDTE +D LSD+ S+ C E+ + +S+ SK+ DL Sbjct: 490 KEKTKSGNDTRAEDCCSETDTEANDALSDSSSDECSLSETRKSCKSNFNSSKSLADL 546 >ref|XP_004148671.1| PREDICTED: protein TONSOKU-like [Cucumis sativus] Length = 1342 Score = 128 bits (321), Expect = 6e-28 Identities = 65/117 (55%), Positives = 85/117 (72%), Gaps = 5/117 (4%) Frame = -2 Query: 346 DSDGNWSGALEAFEEGYRIAFEAKKPSIQISALDNMHYSHMIRFDDINEARKLQLKIQDL 167 D DG W+ AL+AFEE YRIA EAK PS+Q+SAL+NMHYSHMIRFD+ EAR+LQ +I L Sbjct: 430 DCDGKWTEALDAFEESYRIAVEAKLPSVQLSALENMHYSHMIRFDNAEEARRLQCQIDQL 489 Query: 166 KESTVT--DPKPQNCCSETDTEGDDDLSDNRSNAC---ESPRISESSLTRSKTREDL 11 KE T + D + ++CCSETDTE +D LSD+ S+ C E+ + +S+ SK+ DL Sbjct: 490 KEKTKSGNDTRAEDCCSETDTEANDALSDSSSDECSLSETRKSCKSNFNSSKSLADL 546 >ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinifera] Length = 1309 Score = 125 bits (315), Expect = 3e-27 Identities = 64/117 (54%), Positives = 85/117 (72%), Gaps = 4/117 (3%) Frame = -2 Query: 349 LDSDGNWSGALEAFEEGYRIAFEAKKPSIQISALDNMHYSHMIRFDDINEARKLQLKIQD 170 LDSDGNW+GAL+AFEEGYRIA + PS+Q+SAL+NMHYSHMIRFD++ EAR+LQ I Sbjct: 429 LDSDGNWAGALDAFEEGYRIAVQENLPSVQLSALENMHYSHMIRFDNLEEARRLQYLIDK 488 Query: 169 LKESTVTDPKPQN----CCSETDTEGDDDLSDNRSNACESPRISESSLTRSKTREDL 11 LK+S + +N CCSETDTE DD LS++RS+ S + +S R + ++D+ Sbjct: 489 LKQSGNEKHEGRNIAEDCCSETDTERDDCLSNSRSDPSCSVKKGKSKSDRGEFKDDV 545