BLASTX nr result

ID: Coptis24_contig00030301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030301
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis...    91   1e-16
emb|CAN64837.1| hypothetical protein VITISV_030375 [Vitis vinifera]    91   1e-16
ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [...    90   2e-16
ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [...    90   2e-16
dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]         90   2e-16

>ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
           gi|297739984|emb|CBI30166.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/68 (63%), Positives = 55/68 (80%)
 Frame = +2

Query: 2   IGDVKQYALHNVRMILVGNKLDLHTTKRAVPTSMGQALANEYGMKFFETSAKSYYNVEEA 181
           I +++Q+A  NV  ILVGNK D+  +KRAVPTS GQALA+EYG+KFFETSAK+ +NVE+ 
Sbjct: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQV 169

Query: 182 FLSITRDV 205
           F SI RD+
Sbjct: 170 FFSIARDI 177


>emb|CAN64837.1| hypothetical protein VITISV_030375 [Vitis vinifera]
          Length = 237

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/68 (63%), Positives = 55/68 (80%)
 Frame = +2

Query: 2   IGDVKQYALHNVRMILVGNKLDLHTTKRAVPTSMGQALANEYGMKFFETSAKSYYNVEEA 181
           I +++Q+A  NV  ILVGNK D+  +KRAVPTS GQALA+EYG+KFFETSAK+ +NVE+ 
Sbjct: 131 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQV 190

Query: 182 FLSITRDV 205
           F SI RD+
Sbjct: 191 FFSIARDI 198


>ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
           gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related
           protein RABE1c-like [Cucumis sativus]
          Length = 216

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = +2

Query: 2   IGDVKQYALHNVRMILVGNKLDLHTTKRAVPTSMGQALANEYGMKFFETSAKSYYNVEEA 181
           I +++Q+A  NV  ILVGNK D+  +KRAVPTS GQALA+EYG+KFFETSAK+  NVEE 
Sbjct: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 169

Query: 182 FLSITRDV 205
           F SI RD+
Sbjct: 170 FFSIARDI 177


>ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
           gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related
           protein RABE1a-like [Cucumis sativus]
          Length = 216

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = +2

Query: 2   IGDVKQYALHNVRMILVGNKLDLHTTKRAVPTSMGQALANEYGMKFFETSAKSYYNVEEA 181
           I +++Q+A  NV  ILVGNK D+  +KRAVPTS GQALA+EYG+KFFETSAK+  NVEE 
Sbjct: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 169

Query: 182 FLSITRDV 205
           F SI RD+
Sbjct: 170 FFSIARDI 177


>dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
          Length = 216

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/68 (64%), Positives = 54/68 (79%)
 Frame = +2

Query: 2   IGDVKQYALHNVRMILVGNKLDLHTTKRAVPTSMGQALANEYGMKFFETSAKSYYNVEEA 181
           I +++Q+A  NV  ILVGNK D+  +KRAVPTS GQALA+EYG+KFFETSAK+  NVEE 
Sbjct: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEV 169

Query: 182 FLSITRDV 205
           F SI RD+
Sbjct: 170 FFSIARDI 177


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