BLASTX nr result

ID: Coptis24_contig00030290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030290
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592181.1| Membrane protein, putative [Medicago truncat...    69   5e-10
ref|XP_002304461.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002298073.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003556130.1| PREDICTED: SPX domain-containing membrane pr...    65   4e-09
ref|XP_003536447.1| PREDICTED: SPX domain-containing membrane pr...    65   4e-09

>ref|XP_003592181.1| Membrane protein, putative [Medicago truncatula]
           gi|355481229|gb|AES62432.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 697

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/37 (81%), Positives = 36/37 (97%)
 Frame = -1

Query: 326 LAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 216
           LAGYLGVSR+LN+TLLPSLFIC+ SI+ATC+TYN+LY
Sbjct: 661 LAGYLGVSRLLNITLLPSLFICIFSIIATCYTYNSLY 697


>ref|XP_002304461.1| predicted protein [Populus trichocarpa] gi|222841893|gb|EEE79440.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -1

Query: 326 LAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 216
           LAGYLG S++LNVTLLPSL ICVASI+ATCFTYN+LY
Sbjct: 662 LAGYLGESKLLNVTLLPSLVICVASIVATCFTYNSLY 698


>ref|XP_002298073.1| predicted protein [Populus trichocarpa] gi|222845331|gb|EEE82878.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = -1

Query: 326 LAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 216
           LAGYLG S++LNVTLLPSL IC+ASI+ATCFTYN+LY
Sbjct: 458 LAGYLGESKLLNVTLLPSLVICIASIVATCFTYNSLY 494


>ref|XP_003556130.1| PREDICTED: SPX domain-containing membrane protein At4g22990-like
           [Glycine max]
          Length = 697

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -1

Query: 326 LAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 216
           LAGY GVSR+LNVTL PS FICVASI+ATC+TYN+LY
Sbjct: 661 LAGYGGVSRLLNVTLFPSFFICVASIIATCYTYNSLY 697


>ref|XP_003536447.1| PREDICTED: SPX domain-containing membrane protein At4g22990-like
           [Glycine max]
          Length = 697

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -1

Query: 326 LAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 216
           LAGY GVSR+LNVTLLPS FICV SI+ATC+TYN+LY
Sbjct: 661 LAGYGGVSRLLNVTLLPSFFICVGSIIATCYTYNSLY 697


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